Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC092692.1-201ENST00000623625 2595 ntBASIC5.86□□□□□ -1.47
CDH12P55289 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 GUCY1B2-204ENST00000531898 1979 ntBASIC5.86□□□□□ -1.47
CDH12P55289 AC068446.1-201ENST00000556425 1549 ntBASIC5.86□□□□□ -1.47
CDH12P55289 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH12P55289 RNA5SP308-201ENST00000362532 115 ntBASIC5.86□□□□□ -1.47
CDH12P55289 RNU11-6P-201ENST00000391127 133 ntBASIC5.86□□□□□ -1.47
CDH12P55289 UBE2V1P15-201ENST00000407776 448 ntBASIC5.86□□□□□ -1.47
CDH12P55289 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH12P55289 EEF1B2P8-201ENST00000414101 671 ntBASIC5.86□□□□□ -1.47
CDH12P55289 AL512504.1-201ENST00000415494 778 ntBASIC5.86□□□□□ -1.47
CDH12P55289 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH12P55289 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH12P55289 HSFY7P-201ENST00000432672 318 ntBASIC5.86□□□□□ -1.47
CDH12P55289 AC092106.2-201ENST00000436597 487 ntBASIC5.86□□□□□ -1.47
CDH12P55289 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH12P55289 HSFY8P-201ENST00000437934 318 ntBASIC5.86□□□□□ -1.47
CDH12P55289 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH12P55289 HSFY5P-201ENST00000453726 309 ntBASIC5.86□□□□□ -1.47
CDH12P55289 RPS27AP3-201ENST00000453803 454 ntBASIC5.86□□□□□ -1.47
CDH12P55289 RPL36AP55-201ENST00000454114 305 ntBASIC5.86□□□□□ -1.47
CDH12P55289 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH12P55289 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH12P55289 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH12P55289 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH12P55289 AC106806.2-201ENST00000509365 500 ntBASIC5.86□□□□□ -1.47
CDH12P55289 RNA5SP400-201ENST00000517155 111 ntBASIC5.86□□□□□ -1.47
CDH12P55289 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH12P55289 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH12P55289 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH12P55289 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH12P55289 AP004607.5-201ENST00000532034 217 ntBASIC5.86□□□□□ -1.47
CDH12P55289 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CDH12P55289 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH12P55289 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH12P55289 CR383656.14-201ENST00000551951 406 ntBASIC5.86□□□□□ -1.47
CDH12P55289 LINC00557-201ENST00000563184 1279 ntBASIC5.86□□□□□ -1.47
CDH12P55289 MIR3189-201ENST00000578735 73 ntBASIC5.86□□□□□ -1.47
CDH12P55289 RN7SL32P-201ENST00000580514 281 ntBASIC5.86□□□□□ -1.47
CDH12P55289 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.86□□□□□ -1.47
CDH12P55289 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH12P55289 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH12P55289 AC040174.2-201ENST00000602701 465 ntBASIC5.86□□□□□ -1.47
CDH12P55289 AC098483.2-201ENST00000603158 454 ntBASIC5.86□□□□□ -1.47
CDH12P55289 MIR6085-201ENST00000618314 110 ntBASIC5.86□□□□□ -1.47
CDH12P55289 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH12P55289 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH12P55289 AC116667.2-201ENST00000641075 823 ntBASIC5.86□□□□□ -1.47
CDH12P55289 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CDH12P55289 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CDH12P55289 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CDH12P55289 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH12P55289 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CDH12P55289 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CDH12P55289 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CDH12P55289 CCAT2-201ENST00000630920 1752 ntBASIC5.85□□□□□ -1.47
CDH12P55289 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH12P55289 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH12P55289 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDH12P55289 AC125238.2-201ENST00000430003 1440 ntBASIC5.85□□□□□ -1.47
CDH12P55289 AL512283.1-201ENST00000606756 1384 ntBASIC5.85□□□□□ -1.47
CDH12P55289 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH12P55289 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH12P55289 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH12P55289 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH12P55289 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH12P55289 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH12P55289 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH12P55289 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH12P55289 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDH12P55289 MIR433-201ENST00000384837 93 ntBASIC5.85□□□□□ -1.47
CDH12P55289 AC026310.1-201ENST00000396004 378 ntBASIC5.85□□□□□ -1.47
CDH12P55289 RPS26P38-201ENST00000414476 348 ntBASIC5.85□□□□□ -1.47
CDH12P55289 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH12P55289 MTND2P15-201ENST00000418575 892 ntBASIC5.85□□□□□ -1.47
CDH12P55289 AL589794.1-201ENST00000424971 390 ntBASIC5.85□□□□□ -1.47
CDH12P55289 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH12P55289 MED28P4-201ENST00000433137 572 ntBASIC5.85□□□□□ -1.47
CDH12P55289 BMS1P11-201ENST00000442351 885 ntBASIC5.85□□□□□ -1.47
CDH12P55289 C1DP3-201ENST00000455013 423 ntBASIC5.85□□□□□ -1.47
CDH12P55289 RPL7L1P3-201ENST00000455249 689 ntBASIC5.85□□□□□ -1.47
CDH12P55289 VPS25P1-201ENST00000455691 508 ntBASIC5.85□□□□□ -1.47
CDH12P55289 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH12P55289 BMS1P9-201ENST00000457640 885 ntBASIC5.85□□□□□ -1.47
CDH12P55289 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH12P55289 AC114728.1-201ENST00000488289 483 ntBASIC5.85□□□□□ -1.47
CDH12P55289 CAB39P1-201ENST00000502277 460 ntBASIC5.85□□□□□ -1.47
CDH12P55289 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH12P55289 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH12P55289 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH12P55289 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.85□□□□□ -1.47
CDH12P55289 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 1118.5 ms