Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.05□□□□□ -1.28
HMGCS2P54868 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.05□□□□□ -1.28
HMGCS2P54868 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.05□□□□□ -1.28
HMGCS2P54868 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGCS2P54868 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.05□□□□□ -1.28
HMGCS2P54868 AC114728.1-201ENST00000488289 483 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.05□□□□□ -1.28
HMGCS2P54868 ATP5LP3-201ENST00000514223 304 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.05□□□□□ -1.28
HMGCS2P54868 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.05□□□□□ -1.28
HMGCS2P54868 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.05□□□□□ -1.28
HMGCS2P54868 AC006530.1-201ENST00000555980 571 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 AC051619.2-201ENST00000559063 397 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 AL356801.1-201ENST00000559320 294 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 MIR5095-201ENST00000578844 88 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.05□□□□□ -1.28
HMGCS2P54868 AC013731.1-201ENST00000604340 883 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 AL445649.1-201ENST00000615941 691 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 AC012254.5-201ENST00000623573 478 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 MIR193BHG-214ENST00000641765 509 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
HMGCS2P54868 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
HMGCS2P54868 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGCS2P54868 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGCS2P54868 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 AP002370.1-201ENST00000528055 1602 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGCS2P54868 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGCS2P54868 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGCS2P54868 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
HMGCS2P54868 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.04□□□□□ -1.28
HMGCS2P54868 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
HMGCS2P54868 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGCS2P54868 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGCS2P54868 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGCS2P54868 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
HMGCS2P54868 RNU105B-201ENST00000364478 208 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 RNU11-6P-201ENST00000391127 133 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 OR7E101P-201ENST00000400428 513 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.04□□□□□ -1.28
HMGCS2P54868 AC097721.1-201ENST00000427150 1253 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.04□□□□□ -1.28
HMGCS2P54868 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.04□□□□□ -1.28
HMGCS2P54868 AC009237.1-201ENST00000442127 744 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.04□□□□□ -1.28
HMGCS2P54868 AC073594.1-201ENST00000462065 364 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 AC008945.1-201ENST00000505144 499 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
HMGCS2P54868 SNORA70.20-201ENST00000516848 126 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.04□□□□□ -1.28
HMGCS2P54868 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
HMGCS2P54868 AC022404.1-201ENST00000555320 273 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 AC007225.2-201ENST00000562529 256 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
HMGCS2P54868 MIR3189-201ENST00000578735 73 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGCS2P54868 AL049840.6-201ENST00000604583 345 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGCS2P54868 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGCS2P54868 AC011379.1-201ENST00000508713 3025 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGCS2P54868 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGCS2P54868 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.04□□□□□ -1.28
HMGCS2P54868 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGCS2P54868 MAPK10-344ENST00000641718 3746 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.04□□□□□ -1.28
HMGCS2P54868 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.04□□□□□ -1.28
HMGCS2P54868 Z93929.1-201ENST00000418200 1475 ntBASIC7.04□□□□□ -1.28
HMGCS2P54868 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
HMGCS2P54868 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGCS2P54868 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
HMGCS2P54868 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGCS2P54868 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
HMGCS2P54868 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
HMGCS2P54868 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGCS2P54868 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGCS2P54868 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGCS2P54868 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGCS2P54868 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGCS2P54868 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
HMGCS2P54868 FAM32BP-201ENST00000344033 333 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 RNA5SP500-201ENST00000364486 119 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 MIR640-201ENST00000385086 96 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 AL391361.1-201ENST00000405580 489 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 RN7SKP278-201ENST00000410504 342 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 Z93019.1-201ENST00000416450 973 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGCS2P54868 AC093155.2-201ENST00000420734 937 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGCS2P54868 BRWD1P3-201ENST00000428816 390 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGCS2P54868 CYCSP22-201ENST00000517555 339 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 IGKV2-19-201ENST00000518132 283 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms