Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
LIMK1P53667 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK1P53667 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.39□□□□□ -1.39
LIMK1P53667 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK1P53667 AC007956.1-201ENST00000555623 542 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK1P53667 MRPS21P8-201ENST00000569196 235 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK1P53667 AC022960.2-201ENST00000616300 666 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
LIMK1P53667 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.39□□□□□ -1.39
LIMK1P53667 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 MSL3P1-202ENST00000440028 1468 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.39□□□□□ -1.39
LIMK1P53667 SHQ1P1-201ENST00000437111 1544 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
LIMK1P53667 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
LIMK1P53667 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.38□□□□□ -1.39
LIMK1P53667 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.38□□□□□ -1.39
LIMK1P53667 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.38□□□□□ -1.39
LIMK1P53667 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.38□□□□□ -1.39
LIMK1P53667 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
LIMK1P53667 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
LIMK1P53667 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 MIR105-2-201ENST00000385083 81 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 MIR1178-201ENST00000408396 91 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.38□□□□□ -1.39
LIMK1P53667 AL713922.1-201ENST00000416477 747 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.38□□□□□ -1.39
LIMK1P53667 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.38□□□□□ -1.39
LIMK1P53667 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.38□□□□□ -1.39
LIMK1P53667 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.38□□□□□ -1.39
LIMK1P53667 ATP5LP2-201ENST00000440646 311 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 MTND4LP12-201ENST00000448237 295 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LIMK1P53667 AL136038.1-201ENST00000497246 351 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 RN7SL104P-201ENST00000498686 293 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 KHDC1P1-201ENST00000511053 508 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 RN7SKP5-201ENST00000517045 272 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 TMEM97P2-201ENST00000517841 403 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 AC027544.3-201ENST00000535082 757 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 AL591767.3-201ENST00000554632 525 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 AC090651.1-201ENST00000567865 634 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 CTSLP2-201ENST00000580501 394 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.38□□□□□ -1.39
LIMK1P53667 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.38□□□□□ -1.39
LIMK1P53667 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.38□□□□□ -1.39
LIMK1P53667 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.38□□□□□ -1.39
LIMK1P53667 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.38□□□□□ -1.39
LIMK1P53667 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.38□□□□□ -1.39
LIMK1P53667 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.38□□□□□ -1.39
LIMK1P53667 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.38□□□□□ -1.39
LIMK1P53667 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
LIMK1P53667 MIPEPP2-201ENST00000422560 1819 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 AC020633.1-201ENST00000468439 2247 ntBASIC6.38□□□□□ -1.39
LIMK1P53667 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK1P53667 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMK1P53667 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMK1P53667 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMK1P53667 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.37□□□□□ -1.39
LIMK1P53667 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.37□□□□□ -1.39
LIMK1P53667 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMK1P53667 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LIMK1P53667 AL354854.1-201ENST00000455940 1363 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMK1P53667 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMK1P53667 RNA5SP443-201ENST00000363083 132 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 AL157702.1-201ENST00000398764 426 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 RN7SKP293-201ENST00000411389 296 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIMK1P53667 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMK1P53667 AC239367.3-201ENST00000428996 814 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMK1P53667 RPS27AP2-201ENST00000457576 465 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 SEPT14P1-201ENST00000458703 648 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 RPL5P16-201ENST00000471467 790 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 RPL12P31-201ENST00000478433 450 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMK1P53667 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMK1P53667 OR2A3P-201ENST00000493774 953 ntBASIC6.37□□□□□ -1.39
LIMK1P53667 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.37□□□□□ -1.39
LIMK1P53667 AC131392.1-201ENST00000506490 633 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms