Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 OR9G2P-201ENST00000533326 880 ntBASIC6.82□□□□□ -1.32
COPB1P53618 AC092451.2-201ENST00000538746 658 ntBASIC6.82□□□□□ -1.32
COPB1P53618 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.82□□□□□ -1.32
COPB1P53618 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.82□□□□□ -1.32
COPB1P53618 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.82□□□□□ -1.32
COPB1P53618 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 AC024933.1-201ENST00000608472 348 ntBASIC6.82□□□□□ -1.32
COPB1P53618 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COPB1P53618 OR7A1P-202ENST00000641542 1158 ntBASIC6.82□□□□□ -1.32
COPB1P53618 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COPB1P53618 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
COPB1P53618 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COPB1P53618 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COPB1P53618 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.81□□□□□ -1.32
COPB1P53618 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COPB1P53618 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COPB1P53618 AC233968.1-201ENST00000611212 1300 ntBASIC6.81□□□□□ -1.32
COPB1P53618 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COPB1P53618 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COPB1P53618 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.81□□□□□ -1.32
COPB1P53618 OR56A4-201ENST00000330728 1209 ntBASIC6.81□□□□□ -1.32
COPB1P53618 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COPB1P53618 SNORA43.1-201ENST00000364863 140 ntBASIC6.81□□□□□ -1.32
COPB1P53618 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.81□□□□□ -1.32
COPB1P53618 RNA5SP155-201ENST00000411154 129 ntBASIC6.81□□□□□ -1.32
COPB1P53618 Z82198.3-201ENST00000421145 199 ntBASIC6.81□□□□□ -1.32
COPB1P53618 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.81□□□□□ -1.32
COPB1P53618 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
COPB1P53618 SETP10-201ENST00000424368 814 ntBASIC6.81□□□□□ -1.32
COPB1P53618 AP003385.1-201ENST00000426387 893 ntBASIC6.81□□□□□ -1.32
COPB1P53618 AL354893.1-201ENST00000433735 348 ntBASIC6.81□□□□□ -1.32
COPB1P53618 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.81□□□□□ -1.32
COPB1P53618 HMGN1P32-201ENST00000441744 256 ntBASIC6.81□□□□□ -1.32
COPB1P53618 GAPDHP37-201ENST00000442317 968 ntBASIC6.81□□□□□ -1.32
COPB1P53618 KF459542.1-201ENST00000450908 553 ntBASIC6.81□□□□□ -1.32
COPB1P53618 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.81□□□□□ -1.32
COPB1P53618 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.81□□□□□ -1.32
COPB1P53618 RN7SL369P-201ENST00000477138 299 ntBASIC6.81□□□□□ -1.32
COPB1P53618 RN7SL502P-201ENST00000481857 290 ntBASIC6.81□□□□□ -1.32
COPB1P53618 RN7SL413P-201ENST00000482700 297 ntBASIC6.81□□□□□ -1.32
COPB1P53618 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COPB1P53618 RPL5P33-201ENST00000487833 905 ntBASIC6.81□□□□□ -1.32
COPB1P53618 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COPB1P53618 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.81□□□□□ -1.32
COPB1P53618 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.81□□□□□ -1.32
COPB1P53618 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.81□□□□□ -1.32
COPB1P53618 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.81□□□□□ -1.32
COPB1P53618 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.81□□□□□ -1.32
COPB1P53618 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.81□□□□□ -1.32
COPB1P53618 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.81□□□□□ -1.32
COPB1P53618 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.81□□□□□ -1.32
COPB1P53618 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
COPB1P53618 PCA3_2.1-201ENST00000612507 409 ntBASIC6.81□□□□□ -1.32
COPB1P53618 AC069234.4-201ENST00000621276 412 ntBASIC6.81□□□□□ -1.32
COPB1P53618 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COPB1P53618 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COPB1P53618 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COPB1P53618 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COPB1P53618 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COPB1P53618 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COPB1P53618 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COPB1P53618 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COPB1P53618 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.81□□□□□ -1.32
COPB1P53618 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.81□□□□□ -1.32
COPB1P53618 AC078880.4-201ENST00000617627 1749 ntBASIC6.81□□□□□ -1.32
COPB1P53618 AC114876.1-201ENST00000490962 1366 ntBASIC6.81□□□□□ -1.32
COPB1P53618 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COPB1P53618 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.8□□□□□ -1.32
COPB1P53618 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.8□□□□□ -1.32
COPB1P53618 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.8□□□□□ -1.32
COPB1P53618 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.8□□□□□ -1.32
COPB1P53618 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COPB1P53618 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
COPB1P53618 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.8□□□□□ -1.32
COPB1P53618 AC013410.2-201ENST00000422627 201 ntBASIC6.8□□□□□ -1.32
COPB1P53618 AC092651.1-201ENST00000426110 312 ntBASIC6.8□□□□□ -1.32
COPB1P53618 BX119904.3-201ENST00000428194 957 ntBASIC6.8□□□□□ -1.32
COPB1P53618 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 AL136455.1-201ENST00000441083 1240 ntBASIC6.8□□□□□ -1.32
COPB1P53618 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.8□□□□□ -1.32
COPB1P53618 AC068491.1-201ENST00000449539 1241 ntBASIC6.8□□□□□ -1.32
COPB1P53618 AC019084.1-201ENST00000457337 432 ntBASIC6.8□□□□□ -1.32
COPB1P53618 RN7SL83P-201ENST00000468131 297 ntBASIC6.8□□□□□ -1.32
COPB1P53618 RN7SL790P-201ENST00000474043 298 ntBASIC6.8□□□□□ -1.32
COPB1P53618 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.8□□□□□ -1.32
COPB1P53618 MTND3P3-201ENST00000505004 126 ntBASIC6.8□□□□□ -1.32
COPB1P53618 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.8□□□□□ -1.32
COPB1P53618 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.8□□□□□ -1.32
COPB1P53618 AC025857.1-201ENST00000525252 377 ntBASIC6.8□□□□□ -1.32
COPB1P53618 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 AC092865.1-201ENST00000544395 1023 ntBASIC6.8□□□□□ -1.32
COPB1P53618 RPL41P2-201ENST00000544920 409 ntBASIC6.8□□□□□ -1.32
COPB1P53618 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.8□□□□□ -1.32
COPB1P53618 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms