Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
PDX1P52945 AC091305.2-201ENST00000624049 1576 ntBASIC6.1□□□□□ -1.43
PDX1P52945 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
PDX1P52945 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.1□□□□□ -1.43
PDX1P52945 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.1□□□□□ -1.43
PDX1P52945 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.1□□□□□ -1.43
PDX1P52945 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.1□□□□□ -1.43
PDX1P52945 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PDX1P52945 OR7E25P-201ENST00000344844 931 ntBASIC6.1□□□□□ -1.43
PDX1P52945 SNORD16-201ENST00000362803 99 ntBASIC6.1□□□□□ -1.43
PDX1P52945 RN7SKP69-201ENST00000365390 305 ntBASIC6.1□□□□□ -1.43
PDX1P52945 AL512422.1-201ENST00000407033 553 ntBASIC6.1□□□□□ -1.43
PDX1P52945 SLC20A1P1-201ENST00000413906 956 ntBASIC6.1□□□□□ -1.43
PDX1P52945 NFYAP1-201ENST00000431953 972 ntBASIC6.1□□□□□ -1.43
PDX1P52945 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.1□□□□□ -1.43
PDX1P52945 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PDX1P52945 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PDX1P52945 AC023194.2-201ENST00000465398 406 ntBASIC6.1□□□□□ -1.43
PDX1P52945 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.1□□□□□ -1.43
PDX1P52945 AC022206.1-201ENST00000495947 347 ntBASIC6.1□□□□□ -1.43
PDX1P52945 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.1□□□□□ -1.43
PDX1P52945 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.1□□□□□ -1.43
PDX1P52945 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.1□□□□□ -1.43
PDX1P52945 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.1□□□□□ -1.43
PDX1P52945 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.1□□□□□ -1.43
PDX1P52945 AC007448.1-201ENST00000582714 234 ntBASIC6.1□□□□□ -1.43
PDX1P52945 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.1□□□□□ -1.43
PDX1P52945 OR7A8P-201ENST00000595427 913 ntBASIC6.1□□□□□ -1.43
PDX1P52945 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.1□□□□□ -1.43
PDX1P52945 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.1□□□□□ -1.43
PDX1P52945 SNORA74.4-201ENST00000607595 199 ntBASIC6.1□□□□□ -1.43
PDX1P52945 AC016590.3-201ENST00000611171 753 ntBASIC6.1□□□□□ -1.43
PDX1P52945 AC103703.1-201ENST00000634783 663 ntBASIC6.1□□□□□ -1.43
PDX1P52945 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 AL731556.1-201ENST00000394628 3711 ntBASIC6.1□□□□□ -1.43
PDX1P52945 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.1□□□□□ -1.43
PDX1P52945 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.1□□□□□ -1.43
PDX1P52945 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.1□□□□□ -1.43
PDX1P52945 KARSP1-201ENST00000451871 1752 ntBASIC6.1□□□□□ -1.43
PDX1P52945 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.1□□□□□ -1.43
PDX1P52945 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.1□□□□□ -1.43
PDX1P52945 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PDX1P52945 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PDX1P52945 AL133243.2-201ENST00000610331 1621 ntBASIC6.1□□□□□ -1.43
PDX1P52945 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
PDX1P52945 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDX1P52945 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.09□□□□□ -1.43
PDX1P52945 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.09□□□□□ -1.43
PDX1P52945 NEK2P2-201ENST00000438441 1338 ntBASIC6.09□□□□□ -1.43
PDX1P52945 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.09□□□□□ -1.43
PDX1P52945 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PDX1P52945 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 AL031985.1-201ENST00000392713 418 ntBASIC6.09□□□□□ -1.43
PDX1P52945 AL023284.3-201ENST00000407767 334 ntBASIC6.09□□□□□ -1.43
PDX1P52945 SNORA81-201ENST00000408493 178 ntBASIC6.09□□□□□ -1.43
PDX1P52945 RN7SKP206-201ENST00000410823 293 ntBASIC6.09□□□□□ -1.43
PDX1P52945 CDY17P-201ENST00000414121 1282 ntBASIC6.09□□□□□ -1.43
PDX1P52945 CHEK2P5-201ENST00000423877 246 ntBASIC6.09□□□□□ -1.43
PDX1P52945 RPS7P14-201ENST00000426405 583 ntBASIC6.09□□□□□ -1.43
PDX1P52945 CDY8P-201ENST00000428380 1279 ntBASIC6.09□□□□□ -1.43
PDX1P52945 AC003989.1-201ENST00000434569 565 ntBASIC6.09□□□□□ -1.43
PDX1P52945 AL157385.1-201ENST00000446973 268 ntBASIC6.09□□□□□ -1.43
PDX1P52945 CDY20P-201ENST00000447528 1279 ntBASIC6.09□□□□□ -1.43
PDX1P52945 RNU6-775P-201ENST00000459318 96 ntBASIC6.09□□□□□ -1.43
PDX1P52945 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.09□□□□□ -1.43
PDX1P52945 PRMT5P1-201ENST00000514351 598 ntBASIC6.09□□□□□ -1.43
PDX1P52945 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.09□□□□□ -1.43
PDX1P52945 AC021733.2-201ENST00000518830 497 ntBASIC6.09□□□□□ -1.43
PDX1P52945 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.09□□□□□ -1.43
PDX1P52945 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.09□□□□□ -1.43
PDX1P52945 AC068768.2-201ENST00000602352 343 ntBASIC6.09□□□□□ -1.43
PDX1P52945 AP005212.4-201ENST00000614206 710 ntBASIC6.09□□□□□ -1.43
PDX1P52945 MIR6886-201ENST00000619864 61 ntBASIC6.09□□□□□ -1.43
PDX1P52945 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.09□□□□□ -1.43
PDX1P52945 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms