Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 RPS27AP3-201ENST00000453803 454 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 RPL7L1P3-201ENST00000455249 689 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 AL022319.1-201ENST00000458183 1167 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 RPL29P23-201ENST00000486188 442 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 RPS27P20-201ENST00000492051 246 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AP003080.1-202ENST00000526526 915 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 BTG1P1-201ENST00000540396 508 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 HMGN2P47-201ENST00000559378 272 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC005632.2-201ENST00000564271 828 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AL138960.1-201ENST00000613838 513 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 HTR1DP1-201ENST00000616500 888 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 HDAC1P2-201ENST00000453661 1398 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC024651.2-201ENST00000562480 2098 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 Z95114.1-201ENST00000624264 14574 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 RNA5SP514-201ENST00000363717 111 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 VN1R20P-201ENST00000425215 966 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC010086.1-201ENST00000437359 1052 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 DNAJC19P5-201ENST00000443295 316 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC097359.1-201ENST00000447946 463 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 HIGD1AP16-201ENST00000450986 258 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC044810.1-201ENST00000480271 711 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC005017.1-201ENST00000482002 490 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 SNX18P24-201ENST00000505249 671 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 Y_RNA.710-201ENST00000516975 110 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 NPIPB14P-203ENST00000532298 987 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 OR4A40P-201ENST00000533878 948 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 AP001858.2-201ENST00000536213 601 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 ARGFXP2-201ENST00000579304 949 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC023389.2-201ENST00000580031 955 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 RPSAP75-201ENST00000605848 301 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 AL352984.2-202ENST00000613699 155 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 IMMTP1-201ENST00000435590 2219 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 AL359091.1-201ENST00000449048 1734 ntBASIC5.51□□□□□ -1.53
CSNK1A1P48729 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CSNK1A1P48729 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.51□□□□□ -1.53
CSNK1A1P48729 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.5□□□□□ -1.53
CSNK1A1P48729 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms