Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC122710.3-201ENST00000606566 541 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AC093635.1-201ENST00000609028 555 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AL121782.1-201ENST00000611242 413 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AL031658.2-201ENST00000616850 651 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 MIR665-201ENST00000635949 72 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AC140479.4-205ENST00000636339 820 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
NKX2-1P43699 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-1P43699 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-1P43699 SAGE3P-201ENST00000619800 1635 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-1P43699 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-1P43699 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-1P43699 SAMM50P1-201ENST00000455403 1399 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AC114876.1-201ENST00000490962 1366 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-1P43699 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
NKX2-1P43699 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NKX2-1P43699 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NKX2-1P43699 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 MIR301B-201ENST00000390813 78 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AMZ2P2-201ENST00000406819 1057 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NKX2-1P43699 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 SOD1P1-201ENST00000407803 440 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-1P43699 GABARAPL3-201ENST00000412799 354 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.17□□□□□ -1.58
NKX2-1P43699 AC015977.1-201ENST00000418887 292 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-1P43699 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-1P43699 CR848007.2-201ENST00000424918 787 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AC092651.1-201ENST00000426110 312 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AC009362.1-201ENST00000427253 406 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.17□□□□□ -1.58
NKX2-1P43699 AL365220.1-201ENST00000432923 399 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-1P43699 OR52U1P-201ENST00000439752 923 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AL606490.8-201ENST00000441624 319 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 MTND6P5-201ENST00000448266 512 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 RPS27AP3-201ENST00000453803 454 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-1P43699 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.17□□□□□ -1.58
NKX2-1P43699 AC099340.1-201ENST00000475247 599 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-1P43699 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-1P43699 PDCL3P1-201ENST00000534575 734 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-1P43699 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-1P43699 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
NKX2-1P43699 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-1P43699 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-1P43699 TMF1P1-201ENST00000576058 373 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NKX2-1P43699 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 AC024451.4-201ENST00000602578 752 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AC093388.1-201ENST00000609166 430 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AP005131.7-201ENST00000610087 611 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 MIR6731-201ENST00000614863 72 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 MIR6829-201ENST00000620375 67 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 AP002371.2-201ENST00000624450 503 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 OR7E91P-202ENST00000642062 1198 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-1P43699 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 AC140479.2-201ENST00000421567 3130 ntBASIC5.17□□□□□ -1.58
NKX2-1P43699 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NKX2-1P43699 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-1P43699 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms