Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HTTP42858 AL138878.2-201ENST00000440581 1241 ntBASIC6.38□□□□□ -1.39
HTTP42858 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HTTP42858 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.38□□□□□ -1.39
HTTP42858 AC126615.2-201ENST00000553003 515 ntBASIC6.38□□□□□ -1.39
HTTP42858 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HTTP42858 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HTTP42858 AR-208ENST00000612452 10676 ntTSL 5 BASIC6.38□□□□□ -1.39
HTTP42858 ZNF556-201ENST00000307635 6574 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
HTTP42858 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 HSPA8P14-201ENST00000552265 1805 ntBASIC6.37□□□□□ -1.39
HTTP42858 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HTTP42858 AC068138.1-201ENST00000412635 217 ntBASIC6.37□□□□□ -1.39
HTTP42858 AC097721.1-201ENST00000427150 1253 ntBASIC6.37□□□□□ -1.39
HTTP42858 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.37□□□□□ -1.39
HTTP42858 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.37□□□□□ -1.39
HTTP42858 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.37□□□□□ -1.39
HTTP42858 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.37□□□□□ -1.39
HTTP42858 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.37□□□□□ -1.39
HTTP42858 AL353662.3-201ENST00000625131 237 ntBASIC6.37□□□□□ -1.39
HTTP42858 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.37□□□□□ -1.39
HTTP42858 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.37□□□□□ -1.39
HTTP42858 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.37□□□□□ -1.39
HTTP42858 AP002364.1-201ENST00000623330 3386 ntBASIC6.37□□□□□ -1.39
HTTP42858 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 UBE2V1P14-201ENST00000415815 558 ntBASIC6.37□□□□□ -1.39
HTTP42858 GTF2IP2-201ENST00000424290 697 ntBASIC6.37□□□□□ -1.39
HTTP42858 DSTNP5-201ENST00000427921 523 ntBASIC6.37□□□□□ -1.39
HTTP42858 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.37□□□□□ -1.39
HTTP42858 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.37□□□□□ -1.39
HTTP42858 AC145423.1-201ENST00000605712 336 ntBASIC6.37□□□□□ -1.39
HTTP42858 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.37□□□□□ -1.39
HTTP42858 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.37□□□□□ -1.39
HTTP42858 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.37□□□□□ -1.39
HTTP42858 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 LGALS8-219ENST00000526589 6420 ntAPPRIS P4 TSL 5 BASIC6.37□□□□□ -1.39
HTTP42858 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.37□□□□□ -1.39
HTTP42858 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 ERG-206ENST00000398911 4914 ntTSL 5 BASIC6.37□□□□□ -1.39
HTTP42858 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HTTP42858 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HTTP42858 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
HTTP42858 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HTTP42858 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HTTP42858 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.36□□□□□ -1.39
HTTP42858 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.36□□□□□ -1.39
HTTP42858 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.36□□□□□ -1.39
HTTP42858 RN7SL51P-201ENST00000468230 285 ntBASIC6.36□□□□□ -1.39
HTTP42858 RN7SL354P-201ENST00000469282 294 ntBASIC6.36□□□□□ -1.39
HTTP42858 AC015818.6-201ENST00000584274 634 ntBASIC6.36□□□□□ -1.39
HTTP42858 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.36□□□□□ -1.39
HTTP42858 AC090527.3-201ENST00000619041 548 ntBASIC6.36□□□□□ -1.39
HTTP42858 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HTTP42858 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HTTP42858 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.36□□□□□ -1.39
HTTP42858 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HTTP42858 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HTTP42858 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HTTP42858 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.36□□□□□ -1.39
HTTP42858 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
HTTP42858 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HTTP42858 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.36□□□□□ -1.39
HTTP42858 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.36□□□□□ -1.39
HTTP42858 AC091390.2-201ENST00000432573 374 ntBASIC6.36□□□□□ -1.39
HTTP42858 MORF4L1P5-201ENST00000433352 961 ntBASIC6.36□□□□□ -1.39
HTTP42858 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.36□□□□□ -1.39
HTTP42858 AC234781.3-201ENST00000452540 973 ntBASIC6.36□□□□□ -1.39
HTTP42858 RN7SL205P-201ENST00000490174 284 ntBASIC6.36□□□□□ -1.39
HTTP42858 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
HTTP42858 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.36□□□□□ -1.39
HTTP42858 RN7SL52P-201ENST00000584271 284 ntBASIC6.36□□□□□ -1.39
HTTP42858 RN7SL722P-201ENST00000617780 284 ntBASIC6.36□□□□□ -1.39
HTTP42858 RN7SL565P-201ENST00000618246 284 ntBASIC6.36□□□□□ -1.39
HTTP42858 AC114947.2-201ENST00000565748 2125 ntBASIC6.36□□□□□ -1.39
HTTP42858 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
HTTP42858 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC6.36□□□□□ -1.39
HTTP42858 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
HTTP42858 AC068870.1-201ENST00000563737 2455 ntBASIC6.36□□□□□ -1.39
HTTP42858 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HTTP42858 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
HTTP42858 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC6.36□□□□□ -1.39
HTTP42858 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HTTP42858 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HTTP42858 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.36□□□□□ -1.39
HTTP42858 AL133482.1-201ENST00000415988 498 ntBASIC6.36□□□□□ -1.39
HTTP42858 RN7SL447P-201ENST00000494711 245 ntBASIC6.36□□□□□ -1.39
HTTP42858 IGBP1P5-201ENST00000507524 1000 ntBASIC6.36□□□□□ -1.39
HTTP42858 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.36□□□□□ -1.39
HTTP42858 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.36□□□□□ -1.39
HTTP42858 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms