Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CKS2P33552 RN7SL261P-201ENST00000613441 282 ntBASIC4.39□□□□□ -1.71
CKS2P33552 AC027559.1-201ENST00000636288 271 ntBASIC4.39□□□□□ -1.71
CKS2P33552 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC4.39□□□□□ -1.71
CKS2P33552 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
CKS2P33552 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.39□□□□□ -1.71
CKS2P33552 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.39□□□□□ -1.71
CKS2P33552 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS2P33552 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS2P33552 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.39□□□□□ -1.71
CKS2P33552 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS2P33552 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CKS2P33552 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CKS2P33552 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CKS2P33552 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CKS2P33552 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CKS2P33552 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CKS2P33552 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 AL078595.2-201ENST00000605309 1780 ntBASIC4.38□□□□□ -1.71
CKS2P33552 AL138820.1-201ENST00000617901 5305 ntBASIC4.38□□□□□ -1.71
CKS2P33552 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS2P33552 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CKS2P33552 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 RNA5SP375-201ENST00000362975 119 ntBASIC4.38□□□□□ -1.71
CKS2P33552 RNA5SP140-201ENST00000364524 92 ntBASIC4.38□□□□□ -1.71
CKS2P33552 SNORA55-201ENST00000364587 135 ntBASIC4.38□□□□□ -1.71
CKS2P33552 RN7SKP69-201ENST00000365390 305 ntBASIC4.38□□□□□ -1.71
CKS2P33552 RNA5SP187-201ENST00000384400 119 ntBASIC4.38□□□□□ -1.71
CKS2P33552 MIR187-201ENST00000385062 109 ntBASIC4.38□□□□□ -1.71
CKS2P33552 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS2P33552 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 AL359633.1-201ENST00000421403 310 ntBASIC4.38□□□□□ -1.71
CKS2P33552 AHCYP8-201ENST00000425108 209 ntBASIC4.38□□□□□ -1.71
CKS2P33552 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS2P33552 CRIP1P1-201ENST00000427567 185 ntBASIC4.38□□□□□ -1.71
CKS2P33552 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS2P33552 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.38□□□□□ -1.71
CKS2P33552 AC022080.2-201ENST00000452932 533 ntBASIC4.38□□□□□ -1.71
CKS2P33552 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 RPL12P39-201ENST00000455456 496 ntBASIC4.38□□□□□ -1.71
CKS2P33552 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS2P33552 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 RN7SL263P-201ENST00000467969 290 ntBASIC4.38□□□□□ -1.71
CKS2P33552 RN7SL314P-201ENST00000490735 292 ntBASIC4.38□□□□□ -1.71
CKS2P33552 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 CFI-204ENST00000510800 667 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS2P33552 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.38□□□□□ -1.71
CKS2P33552 AC078899.1-201ENST00000521432 1185 ntBASIC4.38□□□□□ -1.71
CKS2P33552 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS2P33552 RPL3P13-201ENST00000550415 216 ntBASIC4.38□□□□□ -1.71
CKS2P33552 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS2P33552 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.38□□□□□ -1.71
CKS2P33552 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC4.38□□□□□ -1.71
CKS2P33552 AL513327.3-201ENST00000602618 469 ntBASIC4.38□□□□□ -1.71
CKS2P33552 PRR13P3-201ENST00000603578 376 ntBASIC4.38□□□□□ -1.71
CKS2P33552 AC012175.1-201ENST00000603755 531 ntBASIC4.38□□□□□ -1.71
CKS2P33552 AC114477.1-201ENST00000605097 605 ntBASIC4.38□□□□□ -1.71
CKS2P33552 TP53TG1_2.1-201ENST00000611226 182 ntBASIC4.38□□□□□ -1.71
CKS2P33552 MIR6834-201ENST00000622807 81 ntBASIC4.38□□□□□ -1.71
CKS2P33552 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
CKS2P33552 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS2P33552 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CKS2P33552 AC004158.1-201ENST00000564508 4319 ntBASIC4.38□□□□□ -1.71
CKS2P33552 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS2P33552 AC010132.4-201ENST00000569883 1368 ntBASIC4.38□□□□□ -1.71
CKS2P33552 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS2P33552 AP001029.2-203ENST00000589795 4910 ntBASIC4.38□□□□□ -1.71
CKS2P33552 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS2P33552 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CKS2P33552 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.37□□□□□ -1.71
CKS2P33552 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CKS2P33552 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CKS2P33552 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS2P33552 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
CKS2P33552 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CKS2P33552 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.37□□□□□ -1.71
CKS2P33552 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS2P33552 AC095038.1-201ENST00000429248 1591 ntBASIC4.37□□□□□ -1.71
CKS2P33552 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms