Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.85□□□□□ -1.47
COL5A1P20908 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.85□□□□□ -1.47
COL5A1P20908 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL5A1P20908 RPL36P18-201ENST00000419316 318 ntBASIC5.85□□□□□ -1.47
COL5A1P20908 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.85□□□□□ -1.47
COL5A1P20908 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.85□□□□□ -1.47
COL5A1P20908 RPL36AP39-201ENST00000445859 318 ntBASIC5.85□□□□□ -1.47
COL5A1P20908 AC011225.1-201ENST00000457751 369 ntBASIC5.85□□□□□ -1.47
COL5A1P20908 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.85□□□□□ -1.47
COL5A1P20908 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.85□□□□□ -1.47
COL5A1P20908 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.85□□□□□ -1.47
COL5A1P20908 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.85□□□□□ -1.47
COL5A1P20908 PCNAP4-201ENST00000532690 730 ntBASIC5.85□□□□□ -1.47
COL5A1P20908 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.85□□□□□ -1.47
COL5A1P20908 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
COL5A1P20908 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.85□□□□□ -1.47
COL5A1P20908 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.85□□□□□ -1.47
COL5A1P20908 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL5A1P20908 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 AC007342.5-201ENST00000571340 2142 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 Z82209.2-201ENST00000623410 2012 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL5A1P20908 MIR433-201ENST00000384837 93 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 NME1P1-201ENST00000420914 382 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.84□□□□□ -1.47
COL5A1P20908 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.84□□□□□ -1.47
COL5A1P20908 FTH1P2-201ENST00000466086 412 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 UBA52P7-201ENST00000486088 380 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 AC231760.1-201ENST00000498002 260 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.84□□□□□ -1.47
COL5A1P20908 AC027026.1-201ENST00000532323 742 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.84□□□□□ -1.47
COL5A1P20908 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.84□□□□□ -1.47
COL5A1P20908 MIR4776-2-201ENST00000580204 80 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
COL5A1P20908 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC5.84□□□□□ -1.47
COL5A1P20908 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
COL5A1P20908 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 AL136531.3-201ENST00000624378 3658 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A1P20908 AC241584.2-201ENST00000637142 2090 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
COL5A1P20908 AC105235.1-201ENST00000623208 1816 ntBASIC5.84□□□□□ -1.47
COL5A1P20908 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL5A1P20908 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL5A1P20908 AC022034.1-201ENST00000512867 2156 ntBASIC5.84□□□□□ -1.48
COL5A1P20908 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.84□□□□□ -1.48
COL5A1P20908 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL5A1P20908 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC5.83□□□□□ -1.48
COL5A1P20908 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL5A1P20908 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL5A1P20908 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.83□□□□□ -1.48
COL5A1P20908 RNU1-19P-201ENST00000363306 165 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.83□□□□□ -1.48
COL5A1P20908 SPTLC1P2-201ENST00000407089 121 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 AL096829.1-201ENST00000413677 457 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 RPS15AP30-201ENST00000420976 390 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
COL5A1P20908 EEF1B2P6-201ENST00000445713 673 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 ST13P12-201ENST00000508958 1094 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL5A1P20908 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 AC006530.1-201ENST00000555980 571 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
COL5A1P20908 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 AC067852.5-201ENST00000589299 310 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 AC141002.1-201ENST00000607025 279 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.83□□□□□ -1.48
COL5A1P20908 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL5A1P20908 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.83□□□□□ -1.48
COL5A1P20908 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL5A1P20908 GUCY1B2-204ENST00000531898 1979 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL5A1P20908 RN7SKP124-201ENST00000364730 341 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.83□□□□□ -1.48
COL5A1P20908 AL139415.1-201ENST00000424862 352 ntBASIC5.83□□□□□ -1.48
COL5A1P20908 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.83□□□□□ -1.48
COL5A1P20908 EIF3LP3-201ENST00000495197 822 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms