Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.34□□□□□ -1.55
ATF1P18846 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATF1P18846 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATF1P18846 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
ATF1P18846 AC027279.4-201ENST00000624371 2072 ntBASIC5.34□□□□□ -1.55
ATF1P18846 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
ATF1P18846 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATF1P18846 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATF1P18846 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.34□□□□□ -1.55
ATF1P18846 AC004076.2-201ENST00000620532 3323 ntBASIC5.34□□□□□ -1.55
ATF1P18846 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.56
ATF1P18846 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
ATF1P18846 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
ATF1P18846 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
ATF1P18846 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ATF1P18846 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ATF1P18846 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.34□□□□□ -1.56
ATF1P18846 AC020656.2-201ENST00000613291 5309 ntBASIC5.33□□□□□ -1.56
ATF1P18846 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF1P18846 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF1P18846 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ATF1P18846 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
ATF1P18846 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.33□□□□□ -1.56
ATF1P18846 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.33□□□□□ -1.56
ATF1P18846 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
ATF1P18846 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ATF1P18846 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF1P18846 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.33□□□□□ -1.56
ATF1P18846 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
ATF1P18846 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF1P18846 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ATF1P18846 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
ATF1P18846 MIR431-201ENST00000385266 114 ntBASIC5.33□□□□□ -1.56
ATF1P18846 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF1P18846 AL033519.1-201ENST00000407266 307 ntBASIC5.33□□□□□ -1.56
ATF1P18846 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.33□□□□□ -1.56
ATF1P18846 RPL21P50-201ENST00000417698 477 ntBASIC5.33□□□□□ -1.56
ATF1P18846 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.33□□□□□ -1.56
ATF1P18846 RPL7AP14-201ENST00000424041 802 ntBASIC5.33□□□□□ -1.56
ATF1P18846 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
ATF1P18846 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF1P18846 AC234771.4-201ENST00000441416 730 ntBASIC5.33□□□□□ -1.56
ATF1P18846 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.33□□□□□ -1.56
ATF1P18846 GAPDHP23-201ENST00000444823 993 ntBASIC5.33□□□□□ -1.56
ATF1P18846 RPL31P11-202ENST00000454082 372 ntBASIC5.33□□□□□ -1.56
ATF1P18846 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
ATF1P18846 RN7SL790P-201ENST00000474043 298 ntBASIC5.33□□□□□ -1.56
ATF1P18846 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.33□□□□□ -1.56
ATF1P18846 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF1P18846 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF1P18846 snoU109.5-201ENST00000516231 132 ntBASIC5.33□□□□□ -1.56
ATF1P18846 TPM3P3-201ENST00000521343 354 ntBASIC5.33□□□□□ -1.56
ATF1P18846 AC092865.1-201ENST00000544395 1023 ntBASIC5.33□□□□□ -1.56
ATF1P18846 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF1P18846 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.33□□□□□ -1.56
ATF1P18846 AC036176.3-201ENST00000602456 418 ntBASIC5.33□□□□□ -1.56
ATF1P18846 AL512413.1-201ENST00000606489 382 ntBASIC5.33□□□□□ -1.56
ATF1P18846 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF1P18846 MIR6503-201ENST00000622884 86 ntBASIC5.33□□□□□ -1.56
ATF1P18846 AL109924.4-201ENST00000623089 670 ntBASIC5.33□□□□□ -1.56
ATF1P18846 AC009120.7-201ENST00000623452 780 ntBASIC5.33□□□□□ -1.56
ATF1P18846 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF1P18846 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
ATF1P18846 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.33□□□□□ -1.56
ATF1P18846 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF1P18846 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF1P18846 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.33□□□□□ -1.56
ATF1P18846 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF1P18846 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF1P18846 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF1P18846 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.32□□□□□ -1.56
ATF1P18846 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.32□□□□□ -1.56
ATF1P18846 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATF1P18846 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
ATF1P18846 AC004656.1-201ENST00000568479 4951 ntBASIC5.32□□□□□ -1.56
ATF1P18846 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
ATF1P18846 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATF1P18846 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.32□□□□□ -1.56
ATF1P18846 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATF1P18846 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATF1P18846 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.32□□□□□ -1.56
ATF1P18846 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATF1P18846 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATF1P18846 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATF1P18846 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATF1P18846 RNU1-49P-201ENST00000363468 159 ntBASIC5.32□□□□□ -1.56
ATF1P18846 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.32□□□□□ -1.56
ATF1P18846 RN7SKP121-201ENST00000410842 305 ntBASIC5.32□□□□□ -1.56
ATF1P18846 PTCD2P2-201ENST00000415579 1095 ntBASIC5.32□□□□□ -1.56
ATF1P18846 AC002127.1-201ENST00000421305 225 ntBASIC5.32□□□□□ -1.56
ATF1P18846 RPS7P14-201ENST00000426405 583 ntBASIC5.32□□□□□ -1.56
ATF1P18846 RPL5P2-201ENST00000429598 854 ntBASIC5.32□□□□□ -1.56
ATF1P18846 PPIAP10-201ENST00000438675 458 ntBASIC5.32□□□□□ -1.56
ATF1P18846 SOCS5P1-201ENST00000440415 949 ntBASIC5.32□□□□□ -1.56
ATF1P18846 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.32□□□□□ -1.56
ATF1P18846 RN7SL352P-201ENST00000466002 277 ntBASIC5.32□□□□□ -1.56
ATF1P18846 RPL12P31-201ENST00000478433 450 ntBASIC5.32□□□□□ -1.56
ATF1P18846 AC124945.1-201ENST00000485133 188 ntBASIC5.32□□□□□ -1.56
ATF1P18846 GM2AP2-201ENST00000491764 562 ntBASIC5.32□□□□□ -1.56
ATF1P18846 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms