Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.7□□□□□ -1.34
VTNP04004 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.7□□□□□ -1.34
VTNP04004 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
VTNP04004 AL031985.1-201ENST00000392713 418 ntBASIC6.7□□□□□ -1.34
VTNP04004 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.7□□□□□ -1.34
VTNP04004 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.7□□□□□ -1.34
VTNP04004 PCBP2P1-201ENST00000437262 977 ntBASIC6.7□□□□□ -1.34
VTNP04004 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.7□□□□□ -1.34
VTNP04004 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.7□□□□□ -1.34
VTNP04004 PPIAP20-201ENST00000449839 135 ntBASIC6.7□□□□□ -1.34
VTNP04004 UBFD1P1-201ENST00000473259 814 ntBASIC6.7□□□□□ -1.34
VTNP04004 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.7□□□□□ -1.34
VTNP04004 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.7□□□□□ -1.34
VTNP04004 MTATP6P1-201ENST00000514057 681 ntBASIC6.7□□□□□ -1.34
VTNP04004 SCARNA18.1-201ENST00000516330 83 ntBASIC6.7□□□□□ -1.34
VTNP04004 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.7□□□□□ -1.34
VTNP04004 AP004607.6-201ENST00000525033 1202 ntBASIC6.7□□□□□ -1.34
VTNP04004 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.7□□□□□ -1.34
VTNP04004 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.7□□□□□ -1.34
VTNP04004 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.7□□□□□ -1.34
VTNP04004 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.7□□□□□ -1.34
VTNP04004 RN7SL753P-201ENST00000581238 290 ntBASIC6.7□□□□□ -1.34
VTNP04004 AC005244.1-201ENST00000582566 339 ntBASIC6.7□□□□□ -1.34
VTNP04004 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.7□□□□□ -1.34
VTNP04004 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.7□□□□□ -1.34
VTNP04004 MIR6793-201ENST00000612376 63 ntBASIC6.7□□□□□ -1.34
VTNP04004 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.7□□□□□ -1.34
VTNP04004 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.7□□□□□ -1.34
VTNP04004 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
VTNP04004 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
VTNP04004 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.7□□□□□ -1.34
VTNP04004 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.7□□□□□ -1.34
VTNP04004 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
VTNP04004 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTNP04004 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.7□□□□□ -1.34
VTNP04004 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
VTNP04004 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.69□□□□□ -1.34
VTNP04004 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.69□□□□□ -1.34
VTNP04004 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 RPS15AP30-201ENST00000420976 390 ntBASIC6.69□□□□□ -1.34
VTNP04004 BX284632.2-201ENST00000421091 399 ntBASIC6.69□□□□□ -1.34
VTNP04004 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 RPL23AP19-201ENST00000436229 369 ntBASIC6.69□□□□□ -1.34
VTNP04004 AL512605.1-202ENST00000441919 381 ntBASIC6.69□□□□□ -1.34
VTNP04004 AL359955.2-201ENST00000445380 353 ntBASIC6.69□□□□□ -1.34
VTNP04004 AC016027.4-201ENST00000450866 277 ntBASIC6.69□□□□□ -1.34
VTNP04004 OR2AF1P-201ENST00000454899 889 ntBASIC6.69□□□□□ -1.34
VTNP04004 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.69□□□□□ -1.34
VTNP04004 RN7SL269P-201ENST00000467795 305 ntBASIC6.69□□□□□ -1.34
VTNP04004 AC007998.1-201ENST00000474156 672 ntBASIC6.69□□□□□ -1.34
VTNP04004 KCTD9P4-201ENST00000526766 1166 ntBASIC6.69□□□□□ -1.34
VTNP04004 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 AL021368.3-201ENST00000607119 578 ntBASIC6.69□□□□□ -1.34
VTNP04004 AC103703.1-201ENST00000634783 663 ntBASIC6.69□□□□□ -1.34
VTNP04004 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.69□□□□□ -1.34
VTNP04004 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 KARSP1-201ENST00000451871 1752 ntBASIC6.69□□□□□ -1.34
VTNP04004 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTNP04004 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
VTNP04004 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.69□□□□□ -1.34
VTNP04004 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.68□□□□□ -1.34
VTNP04004 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VTNP04004 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms