Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 EMC3-AS1-205ENST00000438698 534 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 AC239800.1-201ENST00000442049 719 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.87□□□□□ -1.63
SSSCA1O60232 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 RPL12P39-201ENST00000455456 496 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.87□□□□□ -1.63
SSSCA1O60232 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.87□□□□□ -1.63
SSSCA1O60232 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC114940.1-201ENST00000512162 1265 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC022106.1-201ENST00000612834 766 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC099654.15-201ENST00000639802 509 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 QRSL1P3-201ENST00000552666 1316 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.87□□□□□ -1.63
SSSCA1O60232 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 BX284613.1-201ENST00000452221 1641 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SSSCA1O60232 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.86□□□□□ -1.63
SSSCA1O60232 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.86□□□□□ -1.63
SSSCA1O60232 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.86□□□□□ -1.63
SSSCA1O60232 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 OR10R3P-201ENST00000361688 942 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SSSCA1O60232 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SSSCA1O60232 RPL11P3-201ENST00000395256 523 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 MYL6P5-201ENST00000412707 459 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 CDC42P6-201ENST00000421246 576 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 VTI1BP4-201ENST00000427516 527 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.86□□□□□ -1.63
SSSCA1O60232 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.86□□□□□ -1.63
SSSCA1O60232 COL11A2P1-205ENST00000441798 676 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.86□□□□□ -1.63
SSSCA1O60232 FRG2FP-204ENST00000453982 852 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC4.86□□□□□ -1.63
SSSCA1O60232 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.86□□□□□ -1.63
SSSCA1O60232 AC010409.2-201ENST00000505780 478 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 RBMS2P1-201ENST00000525031 1226 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 AC090424.1-201ENST00000535243 736 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.86□□□□□ -1.63
SSSCA1O60232 AC084824.2-201ENST00000548906 345 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 AC023080.1-201ENST00000551663 931 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 AC090826.1-203ENST00000569235 490 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.86□□□□□ -1.63
SSSCA1O60232 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.86□□□□□ -1.63
SSSCA1O60232 AL583832.1-201ENST00000603227 784 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 AL591167.1-201ENST00000607321 456 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 AL133481.2-203ENST00000607558 139 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.86□□□□□ -1.63
SSSCA1O60232 AL137058.3-201ENST00000624531 3099 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.86□□□□□ -1.63
SSSCA1O60232 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.86□□□□□ -1.63
SSSCA1O60232 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SSSCA1O60232 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.86□□□□□ -1.63
SSSCA1O60232 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
SSSCA1O60232 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 AC011416.1-201ENST00000514947 1732 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSSCA1O60232 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.86□□□□□ -1.63
SSSCA1O60232 AC140479.2-201ENST00000421567 3130 ntBASIC4.86□□□□□ -1.63
SSSCA1O60232 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.85□□□□□ -1.63
SSSCA1O60232 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 AC130304.1-201ENST00000622942 2385 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms