Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NPM1P26-201ENST00000426339 738 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM38O00635 MRPS33P4-201ENST00000434892 317 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM38O00635 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM38O00635 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM38O00635 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM38O00635 MTND5P8-201ENST00000449817 1083 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM38O00635 RPL26P30-201ENST00000453533 435 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.57□□□□□ -1.36
TRIM38O00635 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM38O00635 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.57□□□□□ -1.36
TRIM38O00635 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM38O00635 SNORA58-201ENST00000505219 137 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 AC018797.1-201ENST00000510791 255 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.57□□□□□ -1.36
TRIM38O00635 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.57□□□□□ -1.36
TRIM38O00635 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM38O00635 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 LINC00557-201ENST00000563184 1279 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
TRIM38O00635 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM38O00635 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.57□□□□□ -1.36
TRIM38O00635 AL953862.2-201ENST00000603089 820 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 AC007423.1-201ENST00000605009 627 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 AC114477.1-201ENST00000605097 605 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 AL355480.1-201ENST00000629041 99 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM38O00635 AC007485.2-201ENST00000623493 1667 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TRIM38O00635 PSMA6P1-201ENST00000400275 741 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 OR7E156P-201ENST00000400303 464 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 RNA5SP115-201ENST00000411160 107 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 AC017078.1-201ENST00000416146 368 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM38O00635 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 UBBP5-201ENST00000446970 266 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 RAB28P3-201ENST00000448325 597 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 AC144530.1-201ENST00000452862 555 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM38O00635 RPL12P24-201ENST00000474907 486 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM38O00635 AC113367.2-201ENST00000505749 160 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM38O00635 AC108157.1-201ENST00000510511 539 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 AL390198.2-201ENST00000510553 222 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM38O00635 IGKV2-4-201ENST00000523070 340 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM38O00635 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM38O00635 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM38O00635 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM38O00635 AL445383.1-201ENST00000554689 874 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 AC026956.1-201ENST00000558741 396 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 ADAD1P2-201ENST00000588476 646 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 AC092474.3-201ENST00000603022 568 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 SNORD96A-201ENST00000606577 79 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 MIR6861-201ENST00000618657 64 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM38O00635 AC063952.1-203ENST00000634410 658 ntBASIC6.56□□□□□ -1.36
TRIM38O00635 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
TRIM38O00635 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
TRIM38O00635 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM38O00635 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM38O00635 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM38O00635 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM38O00635 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM38O00635 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM38O00635 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM38O00635 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
TRIM38O00635 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 AL033543.1-201ENST00000623440 13454 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms