Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 PARP4P2-201ENST00000446672 3326 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 PSMC1P6-201ENST00000477233 1319 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC016583.1-201ENST00000624221 2431 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 U3.14-201ENST00000365363 227 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 RNA5SP231-201ENST00000410496 138 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 DPPA2P2-201ENST00000418220 897 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC016908.1-201ENST00000442571 1219 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC019080.2-201ENST00000453859 394 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 RN7SL390P-201ENST00000470634 284 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 ANK3-213ENST00000486349 493 ntTSL 2 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 RPSAP51-201ENST00000497462 645 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC010409.2-201ENST00000505780 478 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC134698.1-201ENST00000511619 643 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 SSU72P6-201ENST00000532644 488 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 MIR1273F-201ENST00000580581 99 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC090774.2-201ENST00000584708 322 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC006115.2-201ENST00000596823 202 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC024085.1-201ENST00000604299 432 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC019257.2-201ENST00000605539 497 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC008626.2-201ENST00000624425 248 ntBASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RBFOX3A6NFN3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 LRRC37A15P-201ENST00000514785 1355 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC125336.1-201ENST00000508893 2827 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 RNU12-2P-201ENST00000364789 156 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC245096.1-201ENST00000413104 546 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 NMD3P2-201ENST00000421815 761 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 RANP2-201ENST00000456833 229 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 SNORA35.1-201ENST00000458908 128 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 RPL5P15-201ENST00000475870 897 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC079080.1-201ENST00000479841 822 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 RN7SL37P-201ENST00000490461 307 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 OR7E157P-201ENST00000494376 911 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 OR7E99P-201ENST00000505750 922 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 RNA5SP75-201ENST00000516841 111 ntBASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.8□□□□□ -1.64
RBFOX3A6NFN3 NDUFA3P2-201ENST00000531434 232 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms