Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RNA5SP122-201ENST00000384457 108 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RNU6-1257P-201ENST00000384625 110 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RNU6-584P-201ENST00000410350 95 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC079807.1-201ENST00000429993 481 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 EIF5AP4-201ENST00000441206 465 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC097359.1-201ENST00000447946 463 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 BUD31P2-201ENST00000449374 300 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RPL12P24-201ENST00000474907 486 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 MAST4-IT1-201ENST00000514241 658 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RN7SKP196-201ENST00000516267 345 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RN7SKP98-201ENST00000517070 156 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC011853.1-201ENST00000518911 454 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 OR8X1P-201ENST00000534542 869 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AL121594.4-201ENST00000556211 1196 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC005242.1-201ENST00000585658 438 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RPL29P33-201ENST00000587474 316 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AL359704.2-201ENST00000604335 521 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC139493.1-201ENST00000604368 397 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC004477.3-201ENST00000614061 590 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC004241.2-201ENST00000614562 444 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC073592.6-201ENST00000624271 415 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC097520.1-201ENST00000624435 385 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC008993.2-201ENST00000631744 806 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 MIR1910-201ENST00000636955 80 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AL121936.2-201ENST00000641935 662 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC025809.2-201ENST00000625085 1802 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC005261.6-201ENST00000623072 1387 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 AC006600.2-201ENST00000624834 2506 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 MTCO1P25-201ENST00000414449 1799 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AL136531.3-201ENST00000624378 3658 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 OR2M1P-201ENST00000318104 951 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 RNU6-792P-201ENST00000363490 107 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 UBBP1-201ENST00000392399 473 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 ATP5F1P6-201ENST00000402768 767 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AL049697.3-201ENST00000406493 982 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 RN7SKP296-201ENST00000411185 341 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 RPS7P12-201ENST00000422385 582 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 MTCO2P1-201ENST00000424648 477 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 MORF4L1P7-201ENST00000426038 703 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 KCTD9P1-201ENST00000430462 1167 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 GAPDHP37-201ENST00000442317 968 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 SNRPBP1-201ENST00000443634 282 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC092106.1-201ENST00000444291 373 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms