Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AL592504.1-201ENST00000605319 439 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AC022325.1-201ENST00000502748 2199 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 RNA5SP302-201ENST00000364896 100 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 MRPS6P2-201ENST00000381143 370 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AL662791.3-201ENST00000413771 776 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AL596268.1-201ENST00000427910 1048 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 RPS13P2-201ENST00000437890 455 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AL161722.1-201ENST00000446972 1032 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC018475.1-201ENST00000478358 465 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC025271.1-201ENST00000485045 429 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 RN7SKP5-201ENST00000517045 272 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AL022394.1-201ENST00000606979 292 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 MIR7159-201ENST00000620587 66 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC061999.1-201ENST00000624454 177 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 AC144833.1-201ENST00000567953 4089 ntBASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
KCNIP3Q9Y2W7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 CASC19-255ENST00000641733 1385 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 RNA5SP382-201ENST00000363355 112 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 RNA5SP152-201ENST00000365184 110 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 AL445238.1-204ENST00000400311 463 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 AC009362.1-201ENST00000427253 406 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 MED28P4-201ENST00000433137 572 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 RPL14P5-201ENST00000436474 730 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 KRT8P51-201ENST00000438938 274 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 VN1R96P-201ENST00000446052 858 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 AC068491.1-201ENST00000449539 1241 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 OR52I1-201ENST00000450052 1050 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 RANP2-201ENST00000456833 229 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 RN7SL445P-201ENST00000495609 293 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 Z99943.2-201ENST00000507585 266 ntBASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.16□□□□□ -1.58
KCNIP3Q9Y2W7 AC136777.2-201ENST00000522979 358 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms