Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DPH3P2-201ENST00000422618 250 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 ARL5AP4-201ENST00000430731 512 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC019197.1-207ENST00000431341 635 ntTSL 3 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AL109810.1-201ENST00000435008 495 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC002064.1-201ENST00000445784 733 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 SFTPA3P-201ENST00000446429 367 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC104058.1-201ENST00000448028 297 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AL929410.2-201ENST00000451170 189 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC015911.1-201ENST00000495111 156 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 HMGB1P28-201ENST00000507778 552 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC016877.2-201ENST00000522128 1069 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 LINC01579-201ENST00000553818 561 ntTSL 4 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AL109628.2-201ENST00000554037 201 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC138761.2-201ENST00000583878 343 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC009161.2-201ENST00000624626 138 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 EFCAB13-203ENST00000517484 3466 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 ZBTB20-203ENST00000462705 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AP001120.1-201ENST00000561598 3710 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 XIRP2-205ENST00000409605 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 NLGN4X-208ENST00000538097 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 NBPF25P-201ENST00000606775 2019 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 ELOC-202ENST00000518127 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 SVILP1-201ENST00000422642 2676 ntBASIC8.52□□□□□ -1.05
LHX6Q9UPM6 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 ZNF726-201ENST00000322487 2330 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 LINC01747-202ENST00000441568 2320 ntTSL 2 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 GSDMC-204ENST00000619643 1831 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
LHX6Q9UPM6 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 ZNF816-206ENST00000444460 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC026358.1-201ENST00000539391 2256 ntTSL 3 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 C17orf80-206ENST00000577615 2049 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC012377.1-202ENST00000558675 4811 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 GRM1-207ENST00000507907 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 BRD7P2-201ENST00000466133 1944 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 IPO5P1-201ENST00000593576 2887 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 RNU6-99P-201ENST00000364721 107 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 HNRNPDLP1-201ENST00000412834 550 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC017104.2-201ENST00000417000 321 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC152007.1-201ENST00000428521 224 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 PDCL3P6-201ENST00000429744 706 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 GAPDHP34-201ENST00000432112 823 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 RPS29P3-201ENST00000439929 171 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AL772284.1-201ENST00000443421 905 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC093582.1-201ENST00000447086 385 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 RPL18AP17-201ENST00000455326 198 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 RN7SL445P-201ENST00000495609 293 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC022140.1-202ENST00000507887 638 ntTSL 3 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 SNORA25.10-201ENST00000515926 124 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 RNU6-416P-201ENST00000516265 103 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC022034.4-201ENST00000521930 469 ntTSL 3 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AL389895.1-201ENST00000554127 252 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 ZNF222-203ENST00000587846 537 ntTSL 4 BASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC018926.2-201ENST00000611214 498 ntBASIC8.51□□□□□ -1.05
LHX6Q9UPM6 AC141273.2-201ENST00000618989 130 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms