Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC132219.2-201ENST00000624416 2327 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC023490.2-201ENST00000359859 470 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 MIR16-2-201ENST00000362117 81 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 TRIM60P17-201ENST00000415181 719 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 CHEK2P5-201ENST00000423877 246 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC094019.1-201ENST00000434678 472 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 MTCYBP31-201ENST00000438855 1122 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 NANOGP9-201ENST00000439890 892 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 CRYGGP-201ENST00000443337 145 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AL009048.1-201ENST00000450437 298 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 PPM1AP1-201ENST00000502740 1135 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 MTATP6P1-201ENST00000514057 681 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 RNA5SP206-201ENST00000516703 121 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC091515.1-201ENST00000548110 679 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC090666.1-201ENST00000578241 445 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 DUXAP3-201ENST00000603616 594 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 Z99289.3-201ENST00000605586 594 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AP005229.2-201ENST00000609980 697 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC092266.1-201ENST00000610958 165 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC130456.6-201ENST00000623745 765 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 AC006963.1-201ENST00000624003 1052 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 SAMMSON-214ENST00000641395 1264 ntBASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
ZNRF3Q9ULT6 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 SPATA31C2-201ENST00000324915 3777 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 RNU6-697P-201ENST00000363348 107 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 RNA5SP510-201ENST00000364697 99 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 SNORA51.9-201ENST00000384295 124 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 MTCO2P31-201ENST00000402702 684 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 Z68694.1-201ENST00000413929 841 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 PPIAP27-201ENST00000453800 265 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC131392.1-201ENST00000506490 633 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 OR56A7P-201ENST00000524865 941 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC079905.1-201ENST00000549280 475 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC106785.4-201ENST00000569492 412 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 LINC00556-201ENST00000569603 412 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 RN7SL404P-201ENST00000582421 281 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC005242.1-201ENST00000585658 438 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 FAM72A-208ENST00000607379 1139 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC109309.2-201ENST00000612597 332 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC093783.1-201ENST00000612976 329 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC005277.2-201ENST00000617898 390 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC018692.2-201ENST00000624130 348 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AP000577.1-201ENST00000624366 878 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC103703.1-201ENST00000634783 663 ntBASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ZNRF3Q9ULT6 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms