Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC8.9□□□□□ -0.98
USP35Q9P2H5 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC8.9□□□□□ -0.98
USP35Q9P2H5 AC018645.1-201ENST00000505003 109 ntBASIC8.9□□□□□ -0.98
USP35Q9P2H5 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC8.9□□□□□ -0.98
USP35Q9P2H5 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC8.9□□□□□ -0.98
USP35Q9P2H5 MIR3135A-201ENST00000578460 77 ntBASIC8.9□□□□□ -0.98
USP35Q9P2H5 TEX41-255ENST00000626404 610 ntTSL 5 BASIC8.9□□□□□ -0.98
USP35Q9P2H5 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.9□□□□□ -0.98
USP35Q9P2H5 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
USP35Q9P2H5 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC8.9□□□□□ -0.98
USP35Q9P2H5 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.98
USP35Q9P2H5 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
USP35Q9P2H5 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
USP35Q9P2H5 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.9□□□□□ -0.99
USP35Q9P2H5 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC8.9□□□□□ -0.99
USP35Q9P2H5 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
USP35Q9P2H5 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.9□□□□□ -0.99
USP35Q9P2H5 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 SNORA38B-201ENST00000363524 131 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 RN7SKP81-201ENST00000365603 331 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 FAR1P1-201ENST00000427163 934 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 MTND4P15-201ENST00000437913 1033 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 MTND5P8-201ENST00000449817 1083 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 AC110749.1-201ENST00000462007 357 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 GOLGA5P1-201ENST00000507317 980 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 OR52H2P-201ENST00000514607 902 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 RNU6-491P-201ENST00000516099 110 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 TBCA-209ENST00000522370 435 ntTSL 3 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 AC027369.2-201ENST00000528030 440 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 AC010463.3-201ENST00000594077 500 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 RPL21P136-201ENST00000605378 396 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 AP001437.1-201ENST00000608783 456 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 AC093635.1-201ENST00000609028 555 ntBASIC8.89□□□□□ -0.99
USP35Q9P2H5 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.89□□□□□ -0.99
USP35Q9P2H5 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USP35Q9P2H5 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
USP35Q9P2H5 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
USP35Q9P2H5 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
USP35Q9P2H5 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
USP35Q9P2H5 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC012078.1-201ENST00000405035 1646 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
USP35Q9P2H5 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
USP35Q9P2H5 MTHFD2P5-201ENST00000320415 844 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC066692.1-201ENST00000421721 457 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 CHEK2P5-201ENST00000423877 246 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC068228.1-201ENST00000461723 211 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC105420.1-201ENST00000504389 582 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC008945.1-201ENST00000505144 499 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 AK4P6-201ENST00000505168 528 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 RN7SKP35-201ENST00000517210 151 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 LECT2-205ENST00000522943 574 ntTSL 3 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 TRIM77BP-201ENST00000524985 1119 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 CYCSP38-201ENST00000559840 322 ntBASIC8.88□□□□□ -0.99
USP35Q9P2H5 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC106730.3-201ENST00000624568 641 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms