Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 ZNF101P1-201ENST00000435701 1720 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC023490.2-201ENST00000359859 470 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 RNU6-1251P-201ENST00000364502 107 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 MIR138-2-201ENST00000384916 84 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 ERHP2-201ENST00000402323 299 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 ZNF37CP-201ENST00000406795 241 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AL139100.1-201ENST00000408001 498 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 RNU6ATAC25P-201ENST00000408798 117 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 HIGD1AP12-201ENST00000427832 281 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 RAB9AP5-201ENST00000437794 597 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AL592114.2-201ENST00000440142 532 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 RAB9AP2-201ENST00000443911 597 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 RPLP0P1-201ENST00000457002 361 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 CST12P-201ENST00000457644 362 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC026336.1-201ENST00000466577 351 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 RPL7P16-201ENST00000479738 738 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 RPL5P14-201ENST00000494197 878 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC008967.1-201ENST00000504843 163 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC008565.1-201ENST00000509046 885 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 RNU2-30P-201ENST00000516209 141 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AL031846.1-201ENST00000560933 314 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 MIR378H-201ENST00000579966 83 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 BNIP3P30-201ENST00000601184 574 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AL356986.1-201ENST00000604085 341 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC122710.3-201ENST00000606566 541 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC092653.1-201ENST00000608509 531 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC009237.15-201ENST00000610252 501 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AL359513.1-201ENST00000614364 557 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 U6atac.1-201ENST00000616025 117 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC015660.5-201ENST00000623238 564 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC073488.2-201ENST00000631903 751 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 AL356585.10-201ENST00000641883 123 ntBASIC7.81□□□□□ -1.16
CNTN3Q9P232 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CNTN3Q9P232 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CNTN3Q9P232 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
CNTN3Q9P232 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
CNTN3Q9P232 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CNTN3Q9P232 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CNTN3Q9P232 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CNTN3Q9P232 SGO1P2-201ENST00000429458 1589 ntBASIC7.8□□□□□ -1.16
CNTN3Q9P232 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
CNTN3Q9P232 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.8□□□□□ -1.16
CNTN3Q9P232 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CNTN3Q9P232 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CNTN3Q9P232 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.8□□□□□ -1.16
CNTN3Q9P232 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CNTN3Q9P232 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CNTN3Q9P232 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CNTN3Q9P232 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CNTN3Q9P232 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CNTN3Q9P232 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC7.8□□□□□ -1.16
CNTN3Q9P232 XKRYP4-201ENST00000414395 483 ntBASIC7.8□□□□□ -1.16
CNTN3Q9P232 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.8□□□□□ -1.16
CNTN3Q9P232 YWHAZP5-201ENST00000419975 730 ntBASIC7.8□□□□□ -1.16
CNTN3Q9P232 AC246680.2-201ENST00000422106 389 ntBASIC7.8□□□□□ -1.16
CNTN3Q9P232 AC244035.1-201ENST00000430042 390 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms