Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 IL6STP1-201ENST00000346911 1020 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 Y_RNA.453-201ENST00000384223 109 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 Y_RNA.582-201ENST00000391023 95 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AL391422.1-201ENST00000402155 436 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 PPIAP25-201ENST00000420177 540 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC233728.2-201ENST00000425348 757 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC126124.1-201ENST00000426104 185 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 RPS6P25-201ENST00000464444 748 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC146507.1-201ENST00000468335 354 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 RPL5P17-201ENST00000469685 877 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 RPL7AP56-201ENST00000476420 791 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 RN7SL862P-201ENST00000491550 298 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 PSMA2P2-201ENST00000504319 686 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC073358.1-201ENST00000505671 684 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC097173.1-201ENST00000505862 819 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 PTGES3P3-201ENST00000511479 482 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 EIF4A1P9-201ENST00000576035 1207 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 MIR744-201ENST00000578242 98 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 RN7SL42P-201ENST00000579786 294 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC073137.1-201ENST00000605636 634 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 RN7SL301P-202ENST00000618767 298 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AL607023.1-201ENST00000620045 248 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 LRRC37A17P-201ENST00000570311 4693 ntBASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CUEDC1Q9NWM3 AC012078.1-201ENST00000405035 1646 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 SUGT1P2-201ENST00000379452 992 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 RNU5A-6P-201ENST00000384136 116 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 Y_RNA.460-201ENST00000384255 102 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CCNYL3-201ENST00000407030 998 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 MIR1231-201ENST00000408101 92 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 PNRC2P1-201ENST00000423940 420 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 RBMY2JP-201ENST00000425544 1059 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 EIF4A1P10-201ENST00000428832 1216 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC093019.1-201ENST00000443135 252 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 DPPA3P1-201ENST00000448050 469 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC098824.1-201ENST00000453565 980 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CDC42P1-201ENST00000456658 548 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 OR13C1P-201ENST00000457612 963 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC069439.1-201ENST00000494739 167 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC104971.1-201ENST00000495117 578 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC113208.1-201ENST00000497944 318 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms