Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CNTNAP3Q9BZ76 TROVE2-204ENST00000367445 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 Y_RNA.192-201ENST00000363977 102 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 RN7SKP118-201ENST00000364331 330 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 RN7SKP15-201ENST00000364742 309 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 RNU5A-6P-201ENST00000384136 116 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 GSTA12P-201ENST00000402398 508 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 FCF1P10-201ENST00000407590 479 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 RN7SKP146-201ENST00000410242 334 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC009319.1-201ENST00000411493 754 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AL512649.1-201ENST00000428997 581 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AL512286.1-201ENST00000439244 400 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 TBL1YP1-201ENST00000440297 1026 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 MTND3P1-201ENST00000441336 220 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 TRIM60P16-201ENST00000444048 694 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 WDR82P2-201ENST00000444540 928 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 RN7SL791P-201ENST00000467868 295 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 RN7SL414P-201ENST00000469545 294 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 FTH1P4-201ENST00000480365 553 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 OR5AZ1P-201ENST00000527448 943 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AP002004.1-206ENST00000532441 876 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AADACP1-206ENST00000561502 1193 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC015818.5-201ENST00000578659 356 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 RN7SL32P-201ENST00000580514 281 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC129492.5-201ENST00000603489 315 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AL020991.1-201ENST00000612314 373 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC026951.2-201ENST00000613847 241 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 MIR6729-201ENST00000618194 65 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AL607023.1-201ENST00000620045 248 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC239859.1-201ENST00000449715 2594 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC074198.1-201ENST00000506546 1397 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC135731.2-201ENST00000603029 2098 ntBASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CNTNAP3Q9BZ76 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AP000776.1-201ENST00000530032 1663 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AC011453.1-201ENST00000597619 2239 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 Y_RNA.138-201ENST00000363462 102 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 SNORA40.2-201ENST00000390847 128 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AC011753.4-201ENST00000417974 311 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 ZYG11AP1-201ENST00000430329 837 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 GPM6BP2-201ENST00000432046 144 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AC105052.2-201ENST00000434317 794 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 GPM6BP1-201ENST00000446387 144 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AC239798.1-201ENST00000449024 1176 ntBASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.7□□□□□ -1.18
CNTNAP3Q9BZ76 AC004890.1-201ENST00000461005 181 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms