Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 Y_RNA.160-201ENST00000363677 92 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 RNA5SP279-201ENST00000365513 117 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 RN7SKP81-201ENST00000365603 331 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 Y_RNA.394-201ENST00000383942 103 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 RN7SKP216-201ENST00000411050 312 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 Y_RNA.625-201ENST00000411256 107 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 NUP35P1-201ENST00000422734 947 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC104843.2-201ENST00000427666 297 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 IPO7P1-201ENST00000442031 636 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC078845.1-201ENST00000445293 889 ntTSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 ARL2BPP7-201ENST00000446421 490 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 BX842559.2-201ENST00000451418 605 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC098824.1-201ENST00000453565 980 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 RFC5P1-201ENST00000454419 874 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC244505.3-201ENST00000454598 187 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC093166.4-201ENST00000457867 318 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 RN7SL860P-201ENST00000473738 223 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC069528.1-202ENST00000482888 637 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 ACTR3BP4-201ENST00000503033 1244 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC114786.4-201ENST00000508771 728 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC095059.2-201ENST00000510601 933 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC022483.1-201ENST00000514020 567 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 LRRC34P2-201ENST00000514850 553 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 HNRNPKP5-201ENST00000515300 253 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AL845552.1-201ENST00000556820 323 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC122134.1-201ENST00000565664 1104 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 RPS3AP23-202ENST00000574601 686 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 BNIP3P22-201ENST00000593399 556 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 OR7M1P-201ENST00000608946 533 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AL136097.3-201ENST00000611097 505 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AL160413.1-201ENST00000622780 310 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 SNX18P12-201ENST00000624821 759 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 PCMTD1P7-201ENST00000634506 357 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 MTND5P1-201ENST00000445440 1375 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC025040.2-201ENST00000558657 1852 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 SHQ1-203ENST00000463369 2065 ntTSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 CX3CR1-206ENST00000542107 3215 ntAPPRIS P1 TSL 4 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 PPP4R1L-202ENST00000334187 2746 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 SOX2-OT-213ENST00000492337 2508 ntTSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 MTCO1P9-201ENST00000505577 1534 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 FANCD2P2-201ENST00000437591 1400 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AP003486.1-201ENST00000525716 3994 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 DCAF8L2-202ENST00000451261 2295 ntAPPRIS P1 TSL 4 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 ABCF2P1-201ENST00000465687 1867 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AL079343.1-201ENST00000572358 1771 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC007823.1-201ENST00000569932 1566 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 OR10J6P-201ENST00000289731 930 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 RNA5SP141-201ENST00000364543 120 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 RN7SKP191-201ENST00000364713 306 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms