Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AL359633.1-201ENST00000421403 310 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AL139184.1-202ENST00000422303 222 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 GAPDHP33-201ENST00000443168 1013 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 SLAMF6P1-201ENST00000451067 602 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 RN7SL37P-201ENST00000490461 307 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 RPL5P14-201ENST00000494197 878 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AC097460.2-201ENST00000511857 741 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AC111000.6-201ENST00000514471 709 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 OR4A43P-201ENST00000532938 908 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AC007068.2-201ENST00000543168 395 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AP006587.6-201ENST00000582128 1091 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 STARD6-204ENST00000584040 660 ntTSL 3 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 OR7E91P-202ENST00000642062 1198 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AC093849.1-201ENST00000563631 2209 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AL138820.1-201ENST00000617901 5305 ntBASIC4.62□□□□□ -1.67
AP1S3Q96PC3 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
AP1S3Q96PC3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 MRRFP1-201ENST00000435941 1675 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 RNA5SP355-201ENST00000365317 135 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC074375.1-201ENST00000372993 192 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 MIR433-201ENST00000384837 93 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 MIR187-201ENST00000385062 109 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AL079341.1-201ENST00000404701 1207 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC007562.1-201ENST00000421819 517 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC000089.1-201ENST00000424559 801 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 ETF1P1-206ENST00000427296 984 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 HMGN2P27-201ENST00000427352 270 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 RPS27AP6-201ENST00000427962 448 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AL365220.1-201ENST00000432923 399 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 ATP5LP4-201ENST00000434169 307 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC023274.2-201ENST00000445264 521 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 PRELID1P3-201ENST00000450055 643 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 VPS25P1-201ENST00000455691 508 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 RPS16P9-201ENST00000477220 427 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 RN7SL868P-201ENST00000485915 303 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 RN7SL776P-201ENST00000493390 268 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 GOLGA5P1-201ENST00000507317 980 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 B3GNTL1P1-201ENST00000509174 289 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC138832.1-201ENST00000522871 556 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 OR8Q1P-201ENST00000526467 655 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms