Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL590635.1-201ENST00000406314 586 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 RN7SKP296-201ENST00000411185 341 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 AL596268.1-201ENST00000427910 1048 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 RBMY2TP-201ENST00000451162 947 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 RN7SL393P-201ENST00000463588 296 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 SNRPCP11-201ENST00000492453 205 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 OR4A42P-201ENST00000531397 938 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 HNRNPCP1-201ENST00000556181 766 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 ARGFXP2-201ENST00000579304 949 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 AC010487.1-201ENST00000594408 1172 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 MIR6885-201ENST00000612241 66 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 MIR6503-201ENST00000622884 86 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 MTCO1P1-201ENST00000624263 1081 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 AC027575.3-201ENST00000583058 2747 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC093278.2-201ENST00000564956 2485 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 AF287957.1-201ENST00000607368 1595 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 RPL24P4-201ENST00000326586 421 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 RNA5SP308-201ENST00000362532 115 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 SNORA38B-201ENST00000363524 131 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AL033519.1-201ENST00000407266 307 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 RNU2-18P-201ENST00000411224 162 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC002524.1-201ENST00000411687 547 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC245452.2-201ENST00000435222 392 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC064862.5-201ENST00000440618 334 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 UBBP5-201ENST00000446970 266 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AL358913.1-201ENST00000554342 121 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC005519.1-201ENST00000554490 601 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC004232.1-201ENST00000571388 208 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AL390877.1-201ENST00000605704 214 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC244100.4-201ENST00000617747 388 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 TCL6_3.1-201ENST00000619064 137 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 RACGAP1P-201ENST00000550663 1879 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 RBPJP6-201ENST00000411556 1431 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.23□□□□□ -1.41
VMP1Q96GC9 Z95114.1-201ENST00000624264 14574 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms