Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.1□□□□□ -1.27
HPS3Q969F9 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 AC083899.2-201ENST00000423285 1376 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.1□□□□□ -1.27
HPS3Q969F9 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.1□□□□□ -1.27
HPS3Q969F9 CDY11P-201ENST00000447168 1651 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 AC110373.1-201ENST00000505994 3505 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 RNU6-316P-201ENST00000391027 107 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 CCNB2P1-201ENST00000399411 1150 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 MTND2P9-201ENST00000422293 931 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.1□□□□□ -1.27
HPS3Q969F9 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC7.1□□□□□ -1.27
HPS3Q969F9 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.1□□□□□ -1.27
HPS3Q969F9 TXNP2-201ENST00000443918 295 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.1□□□□□ -1.27
HPS3Q969F9 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 AC092967.1-201ENST00000449016 481 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.1□□□□□ -1.27
HPS3Q969F9 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC7.1□□□□□ -1.27
HPS3Q969F9 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC7.1□□□□□ -1.27
HPS3Q969F9 AC131392.1-201ENST00000506490 633 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 AC108157.1-201ENST00000510511 539 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.1□□□□□ -1.27
HPS3Q969F9 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.1□□□□□ -1.27
HPS3Q969F9 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.1□□□□□ -1.27
HPS3Q969F9 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.1□□□□□ -1.27
HPS3Q969F9 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.1□□□□□ -1.27
HPS3Q969F9 AL671309.1-201ENST00000603750 544 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 AC091193.1-201ENST00000604640 448 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.1□□□□□ -1.27
HPS3Q969F9 AP001885.1-201ENST00000621658 558 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 AL132640.3-201ENST00000630473 177 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.1□□□□□ -1.27
HPS3Q969F9 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.1□□□□□ -1.27
HPS3Q969F9 NCOA4P2-201ENST00000340589 1813 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
HPS3Q969F9 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 AL359976.1-201ENST00000418655 3528 ntBASIC7.1□□□□□ -1.27
HPS3Q969F9 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.1□□□□□ -1.27
HPS3Q969F9 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HPS3Q969F9 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.09□□□□□ -1.27
HPS3Q969F9 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
HPS3Q969F9 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HPS3Q969F9 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.09□□□□□ -1.27
HPS3Q969F9 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.09□□□□□ -1.27
HPS3Q969F9 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.09□□□□□ -1.27
HPS3Q969F9 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
HPS3Q969F9 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
HPS3Q969F9 AC105235.1-201ENST00000623208 1816 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HPS3Q969F9 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HPS3Q969F9 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HPS3Q969F9 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HPS3Q969F9 AC245036.1-201ENST00000391727 309 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 AC003045.1-201ENST00000398779 713 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.09□□□□□ -1.27
HPS3Q969F9 AC013410.2-201ENST00000422627 201 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 HSFY1P1-201ENST00000423928 1178 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.09□□□□□ -1.27
HPS3Q969F9 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.09□□□□□ -1.27
HPS3Q969F9 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.09□□□□□ -1.27
HPS3Q969F9 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.09□□□□□ -1.27
HPS3Q969F9 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.09□□□□□ -1.27
HPS3Q969F9 COX4I1P2-201ENST00000447446 547 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 MGAT2P1-201ENST00000449718 797 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 MTND2P30-201ENST00000456663 382 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.09□□□□□ -1.27
HPS3Q969F9 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
HPS3Q969F9 AC005165.2-201ENST00000466070 380 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 AP003385.3-201ENST00000472498 287 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 RN7SL649P-201ENST00000496974 275 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 AC092349.1-201ENST00000504903 310 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 MRPL57P6-201ENST00000506570 309 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC7.09□□□□□ -1.27
HPS3Q969F9 OR4V1P-201ENST00000525394 1140 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC7.09□□□□□ -1.27
HPS3Q969F9 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.09□□□□□ -1.27
HPS3Q969F9 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.09□□□□□ -1.27
HPS3Q969F9 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.09□□□□□ -1.27
HPS3Q969F9 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.09□□□□□ -1.27
HPS3Q969F9 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.09□□□□□ -1.27
HPS3Q969F9 BNIP3P19-201ENST00000605397 577 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 MIR7854-201ENST00000620068 65 ntBASIC7.09□□□□□ -1.27
HPS3Q969F9 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.09□□□□□ -1.27
HPS3Q969F9 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.09□□□□□ -1.27
HPS3Q969F9 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.09□□□□□ -1.27
HPS3Q969F9 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms