Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 IGLV3-6-201ENST00000523937 250 ntBASIC6□□□□□ -1.45
TM9SF4Q92544 OR7E158P-201ENST00000524483 910 ntBASIC6□□□□□ -1.45
TM9SF4Q92544 FAU-203ENST00000525297 355 ntTSL 5 BASIC6□□□□□ -1.45
TM9SF4Q92544 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6□□□□□ -1.45
TM9SF4Q92544 AL138895.2-201ENST00000603019 178 ntBASIC6□□□□□ -1.45
TM9SF4Q92544 RN7SL261P-201ENST00000613441 282 ntBASIC6□□□□□ -1.45
TM9SF4Q92544 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6□□□□□ -1.45
TM9SF4Q92544 AC004836.1-201ENST00000623032 634 ntBASIC6□□□□□ -1.45
TM9SF4Q92544 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF4Q92544 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
TM9SF4Q92544 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6□□□□□ -1.45
TM9SF4Q92544 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6□□□□□ -1.45
TM9SF4Q92544 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6□□□□□ -1.45
TM9SF4Q92544 AC005332.9-201ENST00000620266 2921 ntBASIC6□□□□□ -1.45
TM9SF4Q92544 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6□□□□□ -1.45
TM9SF4Q92544 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TM9SF4Q92544 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
TM9SF4Q92544 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6□□□□□ -1.45
TM9SF4Q92544 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC125238.2-201ENST00000430003 1440 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC068769.1-201ENST00000474767 2426 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 FAM32BP-201ENST00000344033 333 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 RNA5SP188-201ENST00000362916 129 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 GCNT1P4-201ENST00000404096 329 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 RNA5SP251-201ENST00000410614 137 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 RPL23AP18-201ENST00000416139 468 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 AL139415.1-201ENST00000424862 352 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 Z68868.1-201ENST00000429048 544 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC003989.1-201ENST00000434569 565 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC128716.1-201ENST00000475129 166 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 RPL23AP68-201ENST00000480924 445 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC009879.1-201ENST00000520029 839 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 TCL6_3.1-201ENST00000619064 137 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AL512356.3-201ENST00000623005 461 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 LINC02495-203ENST00000636704 242 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC005225.5-201ENST00000623547 2225 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.99□□□□□ -1.45
TM9SF4Q92544 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF4Q92544 AC007159.1-201ENST00000566529 4706 ntBASIC5.99□□□□□ -1.45
TM9SF4Q92544 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.98□□□□□ -1.45
TM9SF4Q92544 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
TM9SF4Q92544 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TM9SF4Q92544 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.98□□□□□ -1.45
TM9SF4Q92544 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM9SF4Q92544 ZNF969P-201ENST00000510345 2341 ntBASIC5.98□□□□□ -1.45
TM9SF4Q92544 AC023245.2-201ENST00000530760 2978 ntBASIC5.98□□□□□ -1.45
TM9SF4Q92544 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM9SF4Q92544 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TM9SF4Q92544 IMMTP1-201ENST00000435590 2219 ntBASIC5.98□□□□□ -1.45
TM9SF4Q92544 RPL31P11-201ENST00000426558 1558 ntBASIC5.98□□□□□ -1.45
TM9SF4Q92544 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.98□□□□□ -1.45
TM9SF4Q92544 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.98□□□□□ -1.45
TM9SF4Q92544 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TM9SF4Q92544 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
TM9SF4Q92544 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.98□□□□□ -1.45
TM9SF4Q92544 LCN1P2-201ENST00000372030 223 ntBASIC5.98□□□□□ -1.45
TM9SF4Q92544 SNORA70.9-201ENST00000384370 135 ntBASIC5.98□□□□□ -1.45
TM9SF4Q92544 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.98□□□□□ -1.45
TM9SF4Q92544 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TM9SF4Q92544 AC097721.1-201ENST00000427150 1253 ntBASIC5.98□□□□□ -1.45
TM9SF4Q92544 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms