Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 MIR122-201ENST00000385044 85 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC128677.1-201ENST00000436016 442 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC245291.3-201ENST00000443400 292 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AL445669.2-201ENST00000454425 421 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 YRDCP3-201ENST00000456507 480 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 RBMY2HP-201ENST00000457961 720 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC105313.1-201ENST00000509121 353 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 MTND4LP31-201ENST00000514859 294 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC026956.1-201ENST00000558741 396 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC138207.8-204ENST00000579588 527 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AL445435.1-201ENST00000604232 665 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC068726.1-201ENST00000610993 341 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 MTCO1P1-201ENST00000624263 1081 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC019226.2-201ENST00000625973 424 ntBASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMARCC2Q8TAQ2 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AL355578.1-201ENST00000607405 1328 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 RNA5SP85-201ENST00000365378 119 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AL365338.1-201ENST00000422282 858 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AC096632.2-201ENST00000438139 1239 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AL691517.1-201ENST00000440833 1235 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AC009237.1-201ENST00000442127 744 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AC108751.3-201ENST00000461814 1020 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 RN7SL836P-201ENST00000476140 296 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 RN7SL413P-201ENST00000482700 297 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 RPL12P7-201ENST00000493832 494 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 EIF4A2P3-201ENST00000525903 1055 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AC068339.2-201ENST00000534395 618 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 LRRC34P1-201ENST00000542742 915 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AC005776.1-201ENST00000603164 290 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AP001033.2-201ENST00000609701 1003 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AC009464.1-201ENST00000615731 469 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AC068787.1-201ENST00000623908 691 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 WBP11P1-201ENST00000562560 1931 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.6□□□□□ -1.19
SMARCC2Q8TAQ2 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.59□□□□□ -1.19
SMARCC2Q8TAQ2 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SMARCC2Q8TAQ2 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.59□□□□□ -1.19
SMARCC2Q8TAQ2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SMARCC2Q8TAQ2 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SMARCC2Q8TAQ2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms