Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 ARL4AP4-201ENST00000434170 518 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AL353662.1-201ENST00000439099 327 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 SOCS5P1-201ENST00000440415 949 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 RN7SL369P-201ENST00000477138 299 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 OR4D12P-201ENST00000509361 911 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AC027544.3-201ENST00000535082 757 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AC007956.1-201ENST00000555623 542 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AC020978.7-201ENST00000575953 1187 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AL356986.1-201ENST00000604085 341 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 GMCL1P2-201ENST00000605230 823 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 FAM72A-208ENST00000607379 1139 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AC012467.1-201ENST00000607740 256 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AC130360.2-201ENST00000533477 1556 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AL353763.1-201ENST00000624467 1628 ntBASIC6.94□□□□□ -1.3
HERC6Q8IVU3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC093278.2-201ENST00000564956 2485 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC008957.3-201ENST00000624112 2242 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 MTND3P20-201ENST00000407663 186 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 MARK2P12-201ENST00000420129 585 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 RPL23AP85-201ENST00000421838 433 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC023141.3-201ENST00000436698 278 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC011742.2-201ENST00000443818 352 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AL133351.3-201ENST00000454998 193 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC023818.1-201ENST00000498379 384 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 RN7SL284P-201ENST00000498823 275 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 IGHV4-55-201ENST00000520889 368 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 MTND2P7-201ENST00000521337 640 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC073333.2-201ENST00000603589 769 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC022467.1-201ENST00000614738 749 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 MIR6826-201ENST00000617808 98 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC131009.3-201ENST00000621809 287 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC119674.1-204ENST00000641348 1343 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HERC6Q8IVU3 AC125238.2-201ENST00000430003 1440 ntBASIC6.93□□□□□ -1.3
HERC6Q8IVU3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms