Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RN7SL339P-201ENST00000580597 296 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 MIR4428-201ENST00000584884 73 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC125494.2-201ENST00000602431 657 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 HMGB1P51-201ENST00000605166 638 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC004808.1-201ENST00000627671 721 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC099654.9-201ENST00000637055 678 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC099654.8-201ENST00000637757 681 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 PROS2P-201ENST00000474651 1951 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.02□□□□□ -1.44
PTCHD4Q6ZW05 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 IMMTP1-201ENST00000435590 2219 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC005225.5-201ENST00000623547 2225 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AKAP17BP-201ENST00000431706 2719 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 FUNDC2P3-201ENST00000334716 533 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 LCN1P2-201ENST00000372030 223 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 SNORA70.9-201ENST00000384370 135 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 RNU6-1000P-201ENST00000391066 106 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AL360271.1-201ENST00000395679 510 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 PDCL3P5-201ENST00000398028 722 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AL023284.3-201ENST00000407767 334 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 OR13Z1P-201ENST00000416141 834 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 MORF4L1P7-201ENST00000426038 703 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AL512637.2-201ENST00000431287 1256 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 MTCO1P45-201ENST00000431457 267 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC114402.2-201ENST00000432760 643 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 MTCYBP15-201ENST00000433123 1127 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 MTND2P21-201ENST00000436242 1042 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 ARL5AP3-201ENST00000439327 386 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AL645931.1-201ENST00000439737 410 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AL353803.3-201ENST00000444641 335 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 RPL31P20-201ENST00000449593 360 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 PCMTD1P3-201ENST00000451824 472 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 CCNJP2-201ENST00000457810 1163 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 RN7SL216P-201ENST00000471607 298 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 RN7SL165P-201ENST00000477476 291 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 TRAV31-201ENST00000502780 342 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 SNX18P23-201ENST00000510867 677 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 OR4A6P-201ENST00000534364 970 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 MIR4800-201ENST00000537353 80 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 NF1P12-201ENST00000549593 583 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 PPIAP6-201ENST00000557078 499 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AL132640.1-201ENST00000559594 619 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 OR51C1P-201ENST00000608504 942 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms