Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC004520.1-201ENST00000608362 1413 ntBASIC7.59□□□□□ -1.19
RNF43Q68DV7 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF43Q68DV7 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF43Q68DV7 AL161891.1-201ENST00000621575 4636 ntBASIC7.59□□□□□ -1.19
RNF43Q68DV7 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.59□□□□□ -1.2
RNF43Q68DV7 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.59□□□□□ -1.2
RNF43Q68DV7 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.59□□□□□ -1.2
RNF43Q68DV7 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 TCP1P3-201ENST00000414406 1498 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 SNORA68-201ENST00000384437 133 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 UBE2V1P9-201ENST00000414760 368 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 GAPDHP75-201ENST00000433910 943 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 PSMD8P1-201ENST00000436275 769 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 MTND5P2-201ENST00000442927 1142 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC044797.1-201ENST00000445744 679 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC104978.1-201ENST00000449387 391 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 MYO5BP2-201ENST00000449815 1277 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC008379.1-201ENST00000463655 464 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 RPL5P14-201ENST00000494197 878 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 RPL21P131-201ENST00000497298 483 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 OR7E163P-201ENST00000505943 894 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 HSPE1P10-201ENST00000508631 558 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 RPL7L1P7-201ENST00000509986 724 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 IGLV1-62-201ENST00000518003 441 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC131935.1-201ENST00000524621 333 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 OR56A7P-201ENST00000524865 941 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 PDCL3P1-201ENST00000534575 734 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC009101.1-201ENST00000568135 242 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 MIR548S-201ENST00000581352 82 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC008759.1-201ENST00000589783 983 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AP002906.1-201ENST00000603405 233 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AL121782.1-201ENST00000611242 413 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC007742.2-201ENST00000618226 398 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AL645927.2-201ENST00000618350 349 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC091931.1-201ENST00000623488 728 ntBASIC7.58□□□□□ -1.2
RNF43Q68DV7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF43Q68DV7 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RNF43Q68DV7 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 SPATA31C1-201ENST00000420021 3895 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AL353898.3-201ENST00000624679 1755 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms