Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 PRELID3BP3-201ENST00000584963 545 ntBASIC7.83□□□□□ -1.16
CCDC93Q567U6 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC93Q567U6 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.83□□□□□ -1.16
CCDC93Q567U6 AC120057.5-201ENST00000623840 154 ntBASIC7.83□□□□□ -1.16
CCDC93Q567U6 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.83□□□□□ -1.16
CCDC93Q567U6 AC138627.1-204ENST00000641894 765 ntBASIC7.83□□□□□ -1.16
CCDC93Q567U6 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC93Q567U6 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.83□□□□□ -1.16
CCDC93Q567U6 WBP11P1-201ENST00000562560 1931 ntBASIC7.83□□□□□ -1.16
CCDC93Q567U6 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC93Q567U6 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.83□□□□□ -1.16
CCDC93Q567U6 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CCDC93Q567U6 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CCDC93Q567U6 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC93Q567U6 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC93Q567U6 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC93Q567U6 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
CCDC93Q567U6 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC93Q567U6 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.83□□□□□ -1.16
CCDC93Q567U6 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC93Q567U6 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC93Q567U6 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 AP005139.1-201ENST00000580702 1647 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC93Q567U6 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC93Q567U6 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 MTND3P20-201ENST00000407663 186 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 BX510359.3-201ENST00000422168 306 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 DUTP4-201ENST00000424782 475 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 BTBD7P2-201ENST00000441962 620 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 HMGN1P36-201ENST00000446623 298 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 AC023141.9-201ENST00000458734 412 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 RN7SL326P-201ENST00000477493 296 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 RPL34P33-201ENST00000486062 334 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 RN7SL629P-201ENST00000489622 285 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 AP000926.3-201ENST00000497201 299 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 RNA5SP438-201ENST00000516561 112 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 AC008627.1-201ENST00000517511 1704 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC93Q567U6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 SNRPGP1-201ENST00000553864 222 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 AC018690.1-201ENST00000608144 626 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 RFPL4AP6-201ENST00000616792 846 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 AL049767.1-202ENST00000637826 242 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 AC132825.8-201ENST00000640783 297 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 AC087269.2-201ENST00000641764 975 ntBASIC7.82□□□□□ -1.16
CCDC93Q567U6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC93Q567U6 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC93Q567U6 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC93Q567U6 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC93Q567U6 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.82□□□□□ -1.16
CCDC93Q567U6 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCDC93Q567U6 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC93Q567U6 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC93Q567U6 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC93Q567U6 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC93Q567U6 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC93Q567U6 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC93Q567U6 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 U3.25-201ENST00000391209 220 ntBASIC7.81□□□□□ -1.16
CCDC93Q567U6 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 MTND2P11-201ENST00000423638 648 ntBASIC7.81□□□□□ -1.16
CCDC93Q567U6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 HIGD1AP16-201ENST00000450986 258 ntBASIC7.81□□□□□ -1.16
CCDC93Q567U6 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 RPS26P39-201ENST00000469206 341 ntBASIC7.81□□□□□ -1.16
CCDC93Q567U6 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 AC114781.3-201ENST00000512083 142 ntBASIC7.81□□□□□ -1.16
CCDC93Q567U6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 AC135626.1-201ENST00000556983 435 ntBASIC7.81□□□□□ -1.16
CCDC93Q567U6 AC092121.1-201ENST00000569452 202 ntBASIC7.81□□□□□ -1.16
CCDC93Q567U6 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 AC005332.4-201ENST00000592752 579 ntBASIC7.81□□□□□ -1.16
CCDC93Q567U6 AL162574.2-201ENST00000614618 657 ntBASIC7.81□□□□□ -1.16
CCDC93Q567U6 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC93Q567U6 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
CCDC93Q567U6 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC93Q567U6 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC93Q567U6 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms