Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.1□□□□□ -1.27
CCNA1P78396 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.1□□□□□ -1.27
CCNA1P78396 TUBB4BP6-201ENST00000437576 479 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 DNAJC19P5-201ENST00000443295 316 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNA1P78396 RPL7L1P4-201ENST00000513004 707 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 TMEM97P2-201ENST00000517841 403 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.1□□□□□ -1.27
CCNA1P78396 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.1□□□□□ -1.27
CCNA1P78396 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.1□□□□□ -1.27
CCNA1P78396 ZNF322P1-201ENST00000568013 1209 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 AC015818.6-201ENST00000584274 634 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 AC006924.1-201ENST00000610750 559 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNA1P78396 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNA1P78396 AC099654.11-201ENST00000638857 294 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CCNA1P78396 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.1□□□□□ -1.27
CCNA1P78396 AC241584.2-201ENST00000637142 2090 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.1□□□□□ -1.27
CCNA1P78396 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CCNA1P78396 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
CCNA1P78396 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCNA1P78396 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CCNA1P78396 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.09□□□□□ -1.27
CCNA1P78396 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CCNA1P78396 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCNA1P78396 AF287957.1-201ENST00000607368 1595 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.09□□□□□ -1.27
CCNA1P78396 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.09□□□□□ -1.27
CCNA1P78396 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCNA1P78396 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.09□□□□□ -1.27
CCNA1P78396 RNA5SP478-201ENST00000364657 115 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CCNA1P78396 RPS3AP2-201ENST00000407190 754 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 U3.43-201ENST00000410734 213 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.09□□□□□ -1.27
CCNA1P78396 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCNA1P78396 BX284632.2-201ENST00000421091 399 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.09□□□□□ -1.27
CCNA1P78396 NDUFS5P5-201ENST00000437256 321 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.09□□□□□ -1.27
CCNA1P78396 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCNA1P78396 RN7SL177P-201ENST00000476596 299 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 AP000648.1-201ENST00000529682 397 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.09□□□□□ -1.27
CCNA1P78396 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.09□□□□□ -1.27
CCNA1P78396 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.09□□□□□ -1.27
CCNA1P78396 COX6CP7-201ENST00000597056 208 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
CCNA1P78396 AC139493.1-201ENST00000604368 397 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 AL031601.1-201ENST00000605702 394 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 AL352984.2-201ENST00000611153 546 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 AL136228.1-201ENST00000622221 319 ntBASIC7.09□□□□□ -1.27
CCNA1P78396 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
CCNA1P78396 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CCNA1P78396 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.09□□□□□ -1.27
CCNA1P78396 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCNA1P78396 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCNA1P78396 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCNA1P78396 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCNA1P78396 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.09□□□□□ -1.27
CCNA1P78396 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCNA1P78396 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CCNA1P78396 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.09□□□□□ -1.27
CCNA1P78396 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CCNA1P78396 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.09□□□□□ -1.28
CCNA1P78396 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CCNA1P78396 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.08□□□□□ -1.28
CCNA1P78396 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 PSG10P-201ENST00000501199 1500 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
CCNA1P78396 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.08□□□□□ -1.28
CCNA1P78396 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.08□□□□□ -1.28
CCNA1P78396 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 TMSB4XP2-201ENST00000335179 210 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 RNA5SP242-201ENST00000364171 118 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 RN7SKP286-201ENST00000410894 299 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.08□□□□□ -1.28
CCNA1P78396 TRGV5P-201ENST00000419915 354 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.08□□□□□ -1.28
CCNA1P78396 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.08□□□□□ -1.28
CCNA1P78396 AL512605.1-202ENST00000441919 381 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AL359955.2-201ENST00000445380 353 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AC023141.9-201ENST00000458734 412 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.08□□□□□ -1.28
CCNA1P78396 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 RPS4XP14-201ENST00000493072 781 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AC112191.2-201ENST00000522428 333 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms