Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TPM4P67936 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
TPM4P67936 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TPM4P67936 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
TPM4P67936 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.8□□□□□ -1.32
TPM4P67936 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
TPM4P67936 RN7SKP166-201ENST00000410812 305 ntBASIC6.8□□□□□ -1.32
TPM4P67936 AL161742.1-201ENST00000418154 584 ntBASIC6.8□□□□□ -1.32
TPM4P67936 AL354766.1-201ENST00000423396 542 ntBASIC6.8□□□□□ -1.32
TPM4P67936 AL645939.3-201ENST00000435408 225 ntBASIC6.8□□□□□ -1.32
TPM4P67936 PPIAP10-201ENST00000438675 458 ntBASIC6.8□□□□□ -1.32
TPM4P67936 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.8□□□□□ -1.32
TPM4P67936 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.8□□□□□ -1.32
TPM4P67936 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.8□□□□□ -1.32
TPM4P67936 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.8□□□□□ -1.32
TPM4P67936 RN7SL284P-201ENST00000498823 275 ntBASIC6.8□□□□□ -1.32
TPM4P67936 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.8□□□□□ -1.32
TPM4P67936 AC018645.1-201ENST00000505003 109 ntBASIC6.8□□□□□ -1.32
TPM4P67936 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.8□□□□□ -1.32
TPM4P67936 AC244502.2-201ENST00000543361 851 ntBASIC6.8□□□□□ -1.32
TPM4P67936 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.8□□□□□ -1.32
TPM4P67936 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.8□□□□□ -1.32
TPM4P67936 AL589743.6-201ENST00000611025 117 ntBASIC6.8□□□□□ -1.32
TPM4P67936 AC103564.3-201ENST00000621194 220 ntBASIC6.8□□□□□ -1.32
TPM4P67936 AC018558.4-201ENST00000622153 281 ntBASIC6.8□□□□□ -1.32
TPM4P67936 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.8□□□□□ -1.32
TPM4P67936 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TPM4P67936 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.8□□□□□ -1.32
TPM4P67936 AL031595.2-201ENST00000624215 19071 ntBASIC6.8□□□□□ -1.32
TPM4P67936 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.8□□□□□ -1.32
TPM4P67936 THAP12P9-201ENST00000503971 2360 ntBASIC6.8□□□□□ -1.32
TPM4P67936 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.8□□□□□ -1.32
TPM4P67936 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.8□□□□□ -1.32
TPM4P67936 AP001157.1-201ENST00000550837 2339 ntBASIC6.79□□□□□ -1.32
TPM4P67936 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
TPM4P67936 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.79□□□□□ -1.32
TPM4P67936 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.79□□□□□ -1.32
TPM4P67936 OR7A2P-201ENST00000304105 930 ntBASIC6.79□□□□□ -1.32
TPM4P67936 RNU6-316P-201ENST00000391027 107 ntBASIC6.79□□□□□ -1.32
TPM4P67936 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.79□□□□□ -1.32
TPM4P67936 PPIAP23-201ENST00000420099 497 ntBASIC6.79□□□□□ -1.32
TPM4P67936 VTI1BP4-201ENST00000427516 527 ntBASIC6.79□□□□□ -1.32
TPM4P67936 RBMY2EP-202ENST00000456360 940 ntBASIC6.79□□□□□ -1.32
TPM4P67936 AC079080.1-201ENST00000479841 822 ntBASIC6.79□□□□□ -1.32
TPM4P67936 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 CCDC11P1-201ENST00000503137 1162 ntBASIC6.79□□□□□ -1.32
TPM4P67936 SNX18P24-201ENST00000505249 671 ntBASIC6.79□□□□□ -1.32
TPM4P67936 TOMM22P4-201ENST00000511318 336 ntBASIC6.79□□□□□ -1.32
TPM4P67936 RNA5SP418-201ENST00000515951 117 ntBASIC6.79□□□□□ -1.32
TPM4P67936 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.79□□□□□ -1.32
TPM4P67936 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.79□□□□□ -1.32
TPM4P67936 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 RN7SL475P-201ENST00000583379 298 ntBASIC6.79□□□□□ -1.32
TPM4P67936 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.79□□□□□ -1.32
TPM4P67936 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.79□□□□□ -1.32
TPM4P67936 MIR6732-201ENST00000619365 60 ntBASIC6.79□□□□□ -1.32
TPM4P67936 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.79□□□□□ -1.32
TPM4P67936 AC005355.2-201ENST00000625064 484 ntBASIC6.79□□□□□ -1.32
TPM4P67936 AC006453.3-201ENST00000635891 377 ntBASIC6.79□□□□□ -1.32
TPM4P67936 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.79□□□□□ -1.32
TPM4P67936 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
TPM4P67936 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
TPM4P67936 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.79□□□□□ -1.32
TPM4P67936 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.79□□□□□ -1.32
TPM4P67936 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM4P67936 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
TPM4P67936 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TPM4P67936 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.78□□□□□ -1.32
TPM4P67936 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TPM4P67936 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 RNU1-49P-201ENST00000363468 159 ntBASIC6.78□□□□□ -1.32
TPM4P67936 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TPM4P67936 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 AC026310.1-201ENST00000396004 378 ntBASIC6.78□□□□□ -1.32
TPM4P67936 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TPM4P67936 RN7SKP117-201ENST00000410175 264 ntBASIC6.78□□□□□ -1.32
TPM4P67936 RN7SKP39-201ENST00000410773 322 ntBASIC6.78□□□□□ -1.32
TPM4P67936 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.78□□□□□ -1.32
TPM4P67936 PTCD2P2-201ENST00000415579 1095 ntBASIC6.78□□□□□ -1.32
TPM4P67936 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.78□□□□□ -1.32
TPM4P67936 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms