Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 TRAV35-201ENST00000390462 330 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC4.39□□□□□ -1.71
CKS1BP61024 AC003989.1-201ENST00000434569 565 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 OSTCP2-201ENST00000437956 444 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 ARAFP2-201ENST00000440565 559 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC4.39□□□□□ -1.71
CKS1BP61024 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 SRP68P2-201ENST00000456184 254 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 CCNJP2-201ENST00000457810 1163 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 PPP1R2P6-201ENST00000478565 588 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 AC093719.1-201ENST00000480427 441 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 NPM1P29-201ENST00000483112 803 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC4.39□□□□□ -1.71
CKS1BP61024 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC4.39□□□□□ -1.71
CKS1BP61024 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 SSU72P6-201ENST00000532644 488 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC4.39□□□□□ -1.71
CKS1BP61024 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC4.39□□□□□ -1.71
CKS1BP61024 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC4.39□□□□□ -1.71
CKS1BP61024 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC4.39□□□□□ -1.71
CKS1BP61024 FAM30C-201ENST00000561158 410 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 MIR1273F-201ENST00000580581 99 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.39□□□□□ -1.71
CKS1BP61024 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC4.39□□□□□ -1.71
CKS1BP61024 AL589765.5-201ENST00000596133 515 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.39□□□□□ -1.71
CKS1BP61024 ACTG1P22-201ENST00000603793 1099 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 AC092960.1-201ENST00000604762 351 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 AL590032.1-201ENST00000604920 252 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CKS1BP61024 AC005277.2-201ENST00000617898 390 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 AC008626.2-201ENST00000624425 248 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.39□□□□□ -1.71
CKS1BP61024 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CKS1BP61024 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CKS1BP61024 AP001029.2-203ENST00000589795 4910 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC4.39□□□□□ -1.71
CKS1BP61024 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 AC093225.1-201ENST00000506867 1408 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CKS1BP61024 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CKS1BP61024 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CKS1BP61024 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CKS1BP61024 RN7SKP189-201ENST00000365042 330 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 SNORA70.3-201ENST00000365075 132 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC4.38□□□□□ -1.71
CKS1BP61024 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 SETP22-201ENST00000412243 957 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS1BP61024 AC079809.1-201ENST00000415468 276 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 PUDPP2-201ENST00000431423 643 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 NPM1P18-201ENST00000434232 732 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CKS1BP61024 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS1BP61024 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 OR13K1P-201ENST00000444577 975 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 PFN1P11-201ENST00000445829 389 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.38□□□□□ -1.71
CKS1BP61024 RN7SL390P-201ENST00000470634 284 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 AL355032.1-201ENST00000472981 438 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 RPL23AP68-201ENST00000480924 445 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 AC092824.1-201ENST00000483524 576 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 PDPN-205ENST00000487038 607 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 NPM1P27-201ENST00000502784 830 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS1BP61024 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS1BP61024 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 RPS27AP18-201ENST00000515536 459 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms