Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 Y_RNA.465-201ENST00000384293 102 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
GFRA1P56159 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 AL035419.1-201ENST00000397037 564 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AL355379.1-201ENST00000405542 640 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.53□□□□□ -1.36
GFRA1P56159 AP000357.1-201ENST00000409926 1165 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AL139135.1-201ENST00000412675 209 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AC096537.2-201ENST00000413707 714 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AL590806.1-201ENST00000415818 853 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.53□□□□□ -1.36
GFRA1P56159 GEMIN2P2-201ENST00000418195 715 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AC006960.1-201ENST00000419980 153 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 PPIAP23-201ENST00000420099 497 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.53□□□□□ -1.36
GFRA1P56159 MTND1P32-201ENST00000433043 938 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 AC009237.4-201ENST00000441078 238 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AC114928.1-201ENST00000446516 415 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 ELOCP30-201ENST00000447108 299 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AC009961.3-201ENST00000449832 765 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 RPS27AP8-201ENST00000452665 445 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC6.53□□□□□ -1.36
GFRA1P56159 HSPE1P22-201ENST00000456856 327 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AC026348.1-201ENST00000462549 1053 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 CBX5P1-201ENST00000468470 561 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 AF305872.1-201ENST00000485217 471 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 TECRP2-201ENST00000503270 928 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AC073648.3-201ENST00000504939 925 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 MTCYBP37-201ENST00000510642 1133 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 RNU6-232P-201ENST00000517144 64 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 SEPT10P1-201ENST00000517342 1162 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.53□□□□□ -1.36
GFRA1P56159 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.53□□□□□ -1.36
GFRA1P56159 HIGD1AP18-201ENST00000520730 278 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 ST13P6-201ENST00000522430 1102 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 MTCYBP20-201ENST00000524239 1129 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.53□□□□□ -1.36
GFRA1P56159 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.53□□□□□ -1.36
GFRA1P56159 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 RFPL1S-203ENST00000539579 330 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.53□□□□□ -1.36
GFRA1P56159 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 AL132640.1-201ENST00000559594 619 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 FAM30C-201ENST00000561158 410 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.53□□□□□ -1.36
GFRA1P56159 AC135628.1-201ENST00000568867 534 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AC103987.3-201ENST00000582071 292 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 RN7SL667P-201ENST00000582817 298 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 MIR4470-201ENST00000583453 72 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AP001542.2-201ENST00000593141 364 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 AL513548.2-201ENST00000602994 1207 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AL163642.2-201ENST00000604722 1019 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 U91328.4-201ENST00000608919 517 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AL121782.1-201ENST00000611242 413 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AL121809.2-201ENST00000613169 341 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 AC027506.1-201ENST00000621395 198 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AC091931.1-201ENST00000623488 728 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
GFRA1P56159 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 AF131215.2-201ENST00000531549 1710 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
GFRA1P56159 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.52□□□□□ -1.36
GFRA1P56159 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC6.52□□□□□ -1.36
GFRA1P56159 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GFRA1P56159 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GFRA1P56159 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GFRA1P56159 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GFRA1P56159 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
GFRA1P56159 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
GFRA1P56159 RNA5SP355-201ENST00000365317 135 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
GFRA1P56159 FAUP2-201ENST00000394301 401 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 HMGB3P18-201ENST00000406327 590 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms