Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.66□□□□□ -1.34
CASP4P49662 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CASP4P49662 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
CASP4P49662 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CASP4P49662 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.66□□□□□ -1.34
CASP4P49662 AC068769.1-201ENST00000474767 2426 ntBASIC6.66□□□□□ -1.34
CASP4P49662 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CASP4P49662 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.66□□□□□ -1.34
CASP4P49662 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.66□□□□□ -1.34
CASP4P49662 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CASP4P49662 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
CASP4P49662 AC010401.2-201ENST00000575137 4934 ntBASIC6.65□□□□□ -1.34
CASP4P49662 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.34
CASP4P49662 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CASP4P49662 SNORA21-201ENST00000362423 132 ntBASIC6.65□□□□□ -1.34
CASP4P49662 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CASP4P49662 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.65□□□□□ -1.34
CASP4P49662 RPS15AP30-201ENST00000420976 390 ntBASIC6.65□□□□□ -1.34
CASP4P49662 RPL7AP14-201ENST00000424041 802 ntBASIC6.65□□□□□ -1.34
CASP4P49662 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.65□□□□□ -1.34
CASP4P49662 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.65□□□□□ -1.34
CASP4P49662 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.65□□□□□ -1.34
CASP4P49662 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.65□□□□□ -1.34
CASP4P49662 AL445687.2-201ENST00000458156 728 ntBASIC6.65□□□□□ -1.34
CASP4P49662 AP002453.1-201ENST00000492327 668 ntBASIC6.65□□□□□ -1.34
CASP4P49662 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.65□□□□□ -1.34
CASP4P49662 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.65□□□□□ -1.34
CASP4P49662 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.65□□□□□ -1.34
CASP4P49662 CYP4F27P-201ENST00000514557 494 ntBASIC6.65□□□□□ -1.34
CASP4P49662 CR383658.1-201ENST00000514609 734 ntBASIC6.65□□□□□ -1.34
CASP4P49662 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.65□□□□□ -1.34
CASP4P49662 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.65□□□□□ -1.34
CASP4P49662 MIR3154-201ENST00000577829 84 ntBASIC6.65□□□□□ -1.34
CASP4P49662 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.65□□□□□ -1.34
CASP4P49662 MIR132-201ENST00000591554 101 ntBASIC6.65□□□□□ -1.34
CASP4P49662 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.65□□□□□ -1.34
CASP4P49662 AC124916.2-201ENST00000604416 224 ntBASIC6.65□□□□□ -1.34
CASP4P49662 AC009779.8-202ENST00000607990 932 ntBASIC6.65□□□□□ -1.34
CASP4P49662 AL359091.2-201ENST00000609303 556 ntBASIC6.65□□□□□ -1.34
CASP4P49662 AL512652.1-201ENST00000619006 500 ntBASIC6.65□□□□□ -1.34
CASP4P49662 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.65□□□□□ -1.34
CASP4P49662 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CASP4P49662 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CASP4P49662 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CASP4P49662 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
CASP4P49662 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CASP4P49662 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.65□□□□□ -1.35
CASP4P49662 AC005225.5-201ENST00000623547 2225 ntBASIC6.65□□□□□ -1.35
CASP4P49662 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.65□□□□□ -1.35
CASP4P49662 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CASP4P49662 AC022164.1-201ENST00000568767 2673 ntBASIC6.64□□□□□ -1.35
CASP4P49662 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CASP4P49662 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.64□□□□□ -1.35
CASP4P49662 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CASP4P49662 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CASP4P49662 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.64□□□□□ -1.35
CASP4P49662 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CASP4P49662 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CASP4P49662 RNA5SP156-201ENST00000410250 110 ntBASIC6.64□□□□□ -1.35
CASP4P49662 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.64□□□□□ -1.35
CASP4P49662 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.64□□□□□ -1.35
CASP4P49662 AL731534.1-201ENST00000434711 269 ntBASIC6.64□□□□□ -1.35
CASP4P49662 AC002553.3-201ENST00000453002 341 ntBASIC6.64□□□□□ -1.35
CASP4P49662 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.64□□□□□ -1.35
CASP4P49662 AL355032.1-201ENST00000472981 438 ntBASIC6.64□□□□□ -1.35
CASP4P49662 AC091874.2-201ENST00000505889 720 ntBASIC6.64□□□□□ -1.35
CASP4P49662 RN7SKP35-201ENST00000517210 151 ntBASIC6.64□□□□□ -1.35
CASP4P49662 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.64□□□□□ -1.35
CASP4P49662 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.64□□□□□ -1.35
CASP4P49662 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CASP4P49662 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.64□□□□□ -1.35
CASP4P49662 MIR4502-201ENST00000580432 81 ntBASIC6.64□□□□□ -1.35
CASP4P49662 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.64□□□□□ -1.35
CASP4P49662 MIR6806-201ENST00000622141 64 ntBASIC6.64□□□□□ -1.35
CASP4P49662 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.64□□□□□ -1.35
CASP4P49662 AL596275.2-207ENST00000641188 675 ntBASIC6.64□□□□□ -1.35
CASP4P49662 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CASP4P49662 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.64□□□□□ -1.35
CASP4P49662 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CASP4P49662 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.64□□□□□ -1.35
CASP4P49662 AL355377.1-201ENST00000621125 1653 ntBASIC6.64□□□□□ -1.35
CASP4P49662 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CASP4P49662 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
CASP4P49662 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CASP4P49662 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.64□□□□□ -1.35
CASP4P49662 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CASP4P49662 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.63□□□□□ -1.35
CASP4P49662 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 RNU105B-201ENST00000364478 208 ntBASIC6.63□□□□□ -1.35
CASP4P49662 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.63□□□□□ -1.35
CASP4P49662 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.63□□□□□ -1.35
CASP4P49662 AL132875.1-201ENST00000403623 949 ntBASIC6.63□□□□□ -1.35
CASP4P49662 AL121835.1-201ENST00000404250 354 ntBASIC6.63□□□□□ -1.35
CASP4P49662 SNORA77.2-201ENST00000408571 112 ntBASIC6.63□□□□□ -1.35
CASP4P49662 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms