Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MRPS21P5-201ENST00000417885 231 ntBASIC6.7□□□□□ -1.34
SSR1P43307 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.7□□□□□ -1.34
SSR1P43307 RN7SL267P-201ENST00000485107 261 ntBASIC6.7□□□□□ -1.34
SSR1P43307 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.7□□□□□ -1.34
SSR1P43307 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.7□□□□□ -1.34
SSR1P43307 AC093870.1-201ENST00000506837 213 ntBASIC6.7□□□□□ -1.34
SSR1P43307 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.7□□□□□ -1.34
SSR1P43307 AC097486.1-201ENST00000515331 210 ntBASIC6.7□□□□□ -1.34
SSR1P43307 RNU6-1334P-201ENST00000516032 105 ntBASIC6.7□□□□□ -1.34
SSR1P43307 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSR1P43307 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.7□□□□□ -1.34
SSR1P43307 OR9G2P-201ENST00000533326 880 ntBASIC6.7□□□□□ -1.34
SSR1P43307 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.7□□□□□ -1.34
SSR1P43307 AL121579.2-201ENST00000555466 590 ntBASIC6.7□□□□□ -1.34
SSR1P43307 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.7□□□□□ -1.34
SSR1P43307 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.7□□□□□ -1.34
SSR1P43307 AC036176.3-201ENST00000602456 418 ntBASIC6.7□□□□□ -1.34
SSR1P43307 AL390877.1-201ENST00000605704 214 ntBASIC6.7□□□□□ -1.34
SSR1P43307 AL008723.3-201ENST00000608926 449 ntBASIC6.7□□□□□ -1.34
SSR1P43307 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSR1P43307 AC016542.2-201ENST00000624201 619 ntBASIC6.7□□□□□ -1.34
SSR1P43307 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SSR1P43307 LINC02495-203ENST00000636704 242 ntBASIC6.7□□□□□ -1.34
SSR1P43307 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSR1P43307 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSR1P43307 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.7□□□□□ -1.34
SSR1P43307 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.7□□□□□ -1.34
SSR1P43307 AL161756.3-201ENST00000641216 2071 ntBASIC6.7□□□□□ -1.34
SSR1P43307 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSR1P43307 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSR1P43307 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SSR1P43307 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.7□□□□□ -1.34
SSR1P43307 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.7□□□□□ -1.34
SSR1P43307 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.69□□□□□ -1.34
SSR1P43307 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
SSR1P43307 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSR1P43307 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
SSR1P43307 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SSR1P43307 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSR1P43307 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSR1P43307 MAPK10-338ENST00000641647 3362 ntBASIC6.69□□□□□ -1.34
SSR1P43307 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SSR1P43307 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSR1P43307 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.69□□□□□ -1.34
SSR1P43307 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSR1P43307 AC026310.1-201ENST00000396004 378 ntBASIC6.69□□□□□ -1.34
SSR1P43307 ZNF37CP-201ENST00000406795 241 ntBASIC6.69□□□□□ -1.34
SSR1P43307 MIR1266-201ENST00000408125 84 ntBASIC6.69□□□□□ -1.34
SSR1P43307 RN7SKP221-201ENST00000410420 301 ntBASIC6.69□□□□□ -1.34
SSR1P43307 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.69□□□□□ -1.34
SSR1P43307 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.69□□□□□ -1.34
SSR1P43307 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.69□□□□□ -1.34
SSR1P43307 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.69□□□□□ -1.34
SSR1P43307 NPM1P23-201ENST00000440193 849 ntBASIC6.69□□□□□ -1.34
SSR1P43307 HMGN1P32-201ENST00000441744 256 ntBASIC6.69□□□□□ -1.34
SSR1P43307 VPS25P1-201ENST00000455691 508 ntBASIC6.69□□□□□ -1.34
SSR1P43307 OR9A1P-202ENST00000484361 945 ntBASIC6.69□□□□□ -1.34
SSR1P43307 AC122714.1-201ENST00000502510 459 ntBASIC6.69□□□□□ -1.34
SSR1P43307 MINOS1P4-201ENST00000515470 318 ntBASIC6.69□□□□□ -1.34
SSR1P43307 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.69□□□□□ -1.34
SSR1P43307 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.69□□□□□ -1.34
SSR1P43307 COX6B1P4-201ENST00000519826 484 ntBASIC6.69□□□□□ -1.34
SSR1P43307 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSR1P43307 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.69□□□□□ -1.34
SSR1P43307 AC023968.1-201ENST00000560719 475 ntBASIC6.69□□□□□ -1.34
SSR1P43307 AC009120.3-201ENST00000563335 499 ntBASIC6.69□□□□□ -1.34
SSR1P43307 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.69□□□□□ -1.34
SSR1P43307 AC006272.2-201ENST00000594725 163 ntBASIC6.69□□□□□ -1.34
SSR1P43307 RPL7AP69-201ENST00000595306 806 ntBASIC6.69□□□□□ -1.34
SSR1P43307 AC024589.2-201ENST00000605642 1294 ntBASIC6.69□□□□□ -1.34
SSR1P43307 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.69□□□□□ -1.34
SSR1P43307 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.69□□□□□ -1.34
SSR1P43307 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.69□□□□□ -1.34
SSR1P43307 CLUHP10-201ENST00000631979 980 ntBASIC6.69□□□□□ -1.34
SSR1P43307 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.69□□□□□ -1.34
SSR1P43307 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSR1P43307 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSR1P43307 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.69□□□□□ -1.34
SSR1P43307 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSR1P43307 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SSR1P43307 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SSR1P43307 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.69□□□□□ -1.34
SSR1P43307 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.69□□□□□ -1.34
SSR1P43307 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 AC125238.2-201ENST00000430003 1440 ntBASIC6.68□□□□□ -1.34
SSR1P43307 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.68□□□□□ -1.34
SSR1P43307 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SSR1P43307 LINC01616-201ENST00000561816 2280 ntBASIC6.68□□□□□ -1.34
SSR1P43307 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SSR1P43307 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SSR1P43307 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 SNORD16-201ENST00000362803 99 ntBASIC6.68□□□□□ -1.34
SSR1P43307 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.68□□□□□ -1.34
SSR1P43307 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.68□□□□□ -1.34
SSR1P43307 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.68□□□□□ -1.34
SSR1P43307 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms