Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.01□□□□□ -1.29
CIITAP33076 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.01□□□□□ -1.29
CIITAP33076 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.01□□□□□ -1.29
CIITAP33076 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CIITAP33076 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.01□□□□□ -1.29
CIITAP33076 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 SNORD8-201ENST00000363915 110 ntBASIC7.01□□□□□ -1.29
CIITAP33076 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.01□□□□□ -1.29
CIITAP33076 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CIITAP33076 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CIITAP33076 CXADRP1-201ENST00000398098 1095 ntBASIC7.01□□□□□ -1.29
CIITAP33076 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.01□□□□□ -1.29
CIITAP33076 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.01□□□□□ -1.29
CIITAP33076 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.01□□□□□ -1.29
CIITAP33076 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.01□□□□□ -1.29
CIITAP33076 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.01□□□□□ -1.29
CIITAP33076 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.01□□□□□ -1.29
CIITAP33076 RN7SKP35-201ENST00000517210 151 ntBASIC7.01□□□□□ -1.29
CIITAP33076 AC011853.1-201ENST00000518911 454 ntBASIC7.01□□□□□ -1.29
CIITAP33076 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.01□□□□□ -1.29
CIITAP33076 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.01□□□□□ -1.29
CIITAP33076 AC027667.1-201ENST00000545814 304 ntBASIC7.01□□□□□ -1.29
CIITAP33076 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.01□□□□□ -1.29
CIITAP33076 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.01□□□□□ -1.29
CIITAP33076 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.01□□□□□ -1.29
CIITAP33076 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.01□□□□□ -1.29
CIITAP33076 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 AC008555.7-201ENST00000605008 583 ntBASIC7.01□□□□□ -1.29
CIITAP33076 AP001437.1-201ENST00000608783 456 ntBASIC7.01□□□□□ -1.29
CIITAP33076 CXADRP3-202ENST00000617265 1100 ntBASIC7.01□□□□□ -1.29
CIITAP33076 AC073592.6-201ENST00000624271 415 ntBASIC7.01□□□□□ -1.29
CIITAP33076 AP001052.1-201ENST00000626421 99 ntBASIC7.01□□□□□ -1.29
CIITAP33076 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.01□□□□□ -1.29
CIITAP33076 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 AC096921.2-201ENST00000561507 1916 ntBASIC7.01□□□□□ -1.29
CIITAP33076 HSPD1P9-201ENST00000420325 1636 ntBASIC7.01□□□□□ -1.29
CIITAP33076 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7□□□□□ -1.29
CIITAP33076 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7□□□□□ -1.29
CIITAP33076 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CIITAP33076 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7□□□□□ -1.29
CIITAP33076 AP003486.1-201ENST00000525716 3994 ntBASIC7□□□□□ -1.29
CIITAP33076 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7□□□□□ -1.29
CIITAP33076 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7□□□□□ -1.29
CIITAP33076 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7□□□□□ -1.29
CIITAP33076 WBP11P1-201ENST00000562560 1931 ntBASIC7□□□□□ -1.29
CIITAP33076 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7□□□□□ -1.29
CIITAP33076 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CIITAP33076 SNORA51.9-201ENST00000384295 124 ntBASIC7□□□□□ -1.29
CIITAP33076 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC7□□□□□ -1.29
CIITAP33076 PSMD10P2-201ENST00000432890 672 ntBASIC7□□□□□ -1.29
CIITAP33076 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7□□□□□ -1.29
CIITAP33076 AC023141.3-201ENST00000436698 278 ntBASIC7□□□□□ -1.29
CIITAP33076 AC002553.3-201ENST00000453002 341 ntBASIC7□□□□□ -1.29
CIITAP33076 Z83838.1-202ENST00000456225 839 ntBASIC7□□□□□ -1.29
CIITAP33076 AC115223.1-201ENST00000466377 870 ntBASIC7□□□□□ -1.29
CIITAP33076 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7□□□□□ -1.29
CIITAP33076 CR383658.1-201ENST00000514609 734 ntBASIC7□□□□□ -1.29
CIITAP33076 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7□□□□□ -1.29
CIITAP33076 AC092332.1-201ENST00000563684 829 ntBASIC7□□□□□ -1.29
CIITAP33076 AC134669.1-201ENST00000581275 672 ntBASIC7□□□□□ -1.29
CIITAP33076 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7□□□□□ -1.29
CIITAP33076 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7□□□□□ -1.29
CIITAP33076 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC7□□□□□ -1.29
CIITAP33076 AL137067.2-201ENST00000621202 131 ntBASIC7□□□□□ -1.29
CIITAP33076 AC069542.2-201ENST00000624816 216 ntBASIC7□□□□□ -1.29
CIITAP33076 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7□□□□□ -1.29
CIITAP33076 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7□□□□□ -1.29
CIITAP33076 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CIITAP33076 AC022325.1-201ENST00000502748 2199 ntBASIC7□□□□□ -1.29
CIITAP33076 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7□□□□□ -1.29
CIITAP33076 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7□□□□□ -1.29
CIITAP33076 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7□□□□□ -1.29
CIITAP33076 AOX3P-204ENST00000491025 2107 ntBASIC7□□□□□ -1.29
CIITAP33076 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7□□□□□ -1.29
CIITAP33076 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CIITAP33076 AL359091.1-201ENST00000449048 1734 ntBASIC6.99□□□□□ -1.29
CIITAP33076 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CIITAP33076 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CIITAP33076 AP004289.1-201ENST00000436307 2205 ntBASIC6.99□□□□□ -1.29
CIITAP33076 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CIITAP33076 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.99□□□□□ -1.29
CIITAP33076 VN1R12P-201ENST00000403778 876 ntBASIC6.99□□□□□ -1.29
CIITAP33076 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.99□□□□□ -1.29
CIITAP33076 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.99□□□□□ -1.29
CIITAP33076 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.99□□□□□ -1.29
CIITAP33076 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.99□□□□□ -1.29
CIITAP33076 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.99□□□□□ -1.29
CIITAP33076 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.99□□□□□ -1.29
CIITAP33076 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.99□□□□□ -1.29
CIITAP33076 RNU6-362P-201ENST00000516736 90 ntBASIC6.99□□□□□ -1.29
CIITAP33076 AC021733.2-201ENST00000518830 497 ntBASIC6.99□□□□□ -1.29
CIITAP33076 AC008676.3-201ENST00000521237 435 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms