Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.56□□□□□ -1.2
TM4SF1P30408 RNA5SP375-201ENST00000362975 119 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 U3.7-201ENST00000363668 216 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 RN7SKP124-201ENST00000364730 341 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.56□□□□□ -1.2
TM4SF1P30408 RNU4-34P-201ENST00000410431 124 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 CYP4F30P-202ENST00000420048 405 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 AC097721.1-201ENST00000427150 1253 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 AC126120.1-201ENST00000431082 470 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 SPRYD7P1-201ENST00000443861 570 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 YWHABP1-201ENST00000445359 727 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.56□□□□□ -1.2
TM4SF1P30408 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.56□□□□□ -1.2
TM4SF1P30408 RPS23P6-201ENST00000466136 431 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.56□□□□□ -1.2
TM4SF1P30408 AL133445.1-201ENST00000467051 452 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
TM4SF1P30408 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC7.56□□□□□ -1.2
TM4SF1P30408 COPS8P2-201ENST00000473228 627 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 RPS17P15-201ENST00000475609 349 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 AC093270.2-201ENST00000486157 792 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 AC093763.2-201ENST00000505334 1223 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 SNORA43.3-201ENST00000517240 103 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.56□□□□□ -1.2
TM4SF1P30408 AP004607.6-201ENST00000525033 1202 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 MIR3189-201ENST00000578735 73 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 RNU4ATAC-201ENST00000580972 127 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.56□□□□□ -1.2
TM4SF1P30408 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.56□□□□□ -1.2
TM4SF1P30408 AL049840.6-201ENST00000604583 345 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 AL021918.2-201ENST00000613415 194 ntBASIC7.56□□□□□ -1.2
TM4SF1P30408 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.56□□□□□ -1.2
TM4SF1P30408 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.2
TM4SF1P30408 MTCO1P46-201ENST00000451639 1491 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
TM4SF1P30408 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
TM4SF1P30408 AC025809.2-201ENST00000625085 1802 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
TM4SF1P30408 AC241584.2-201ENST00000637142 2090 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 SNORA74A-201ENST00000364089 198 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.55□□□□□ -1.2
TM4SF1P30408 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.55□□□□□ -1.2
TM4SF1P30408 CFL1P1-202ENST00000432948 411 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 Z84478.1-201ENST00000438230 1219 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 PTMAP6-201ENST00000439110 327 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.55□□□□□ -1.2
TM4SF1P30408 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.55□□□□□ -1.2
TM4SF1P30408 UBA52P7-201ENST00000486088 380 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 AC111000.5-201ENST00000506559 1178 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.55□□□□□ -1.2
TM4SF1P30408 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC7.55□□□□□ -1.2
TM4SF1P30408 AC044860.2-201ENST00000561005 179 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 DPPA2P4-201ENST00000563717 878 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.55□□□□□ -1.2
TM4SF1P30408 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.55□□□□□ -1.2
TM4SF1P30408 BIN2P1-201ENST00000504996 1530 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.2
TM4SF1P30408 AC011379.1-201ENST00000508713 3025 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 AP003175.1-201ENST00000641383 6658 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
TM4SF1P30408 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
TM4SF1P30408 MAPK10-344ENST00000641718 3746 ntBASIC7.55□□□□□ -1.2
TM4SF1P30408 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
TM4SF1P30408 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.55□□□□□ -1.2
TM4SF1P30408 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.55□□□□□ -1.2
TM4SF1P30408 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.55□□□□□ -1.2
TM4SF1P30408 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.55□□□□□ -1.2
TM4SF1P30408 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TM4SF1P30408 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.54□□□□□ -1.2
TM4SF1P30408 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.54□□□□□ -1.2
TM4SF1P30408 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
TM4SF1P30408 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TM4SF1P30408 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TM4SF1P30408 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.54□□□□□ -1.2
TM4SF1P30408 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms