Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CNGA1P29973 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.56□□□□□ -1.2
CNGA1P29973 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CNGA1P29973 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CNGA1P29973 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 MTCO1P51-201ENST00000427672 1060 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.56□□□□□ -1.2
CNGA1P29973 FABP5P2-201ENST00000439042 408 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 DNAJA1P5-201ENST00000440278 943 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 XKRY2-201ENST00000442362 1093 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 GAPDHP33-201ENST00000443168 1013 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC7.56□□□□□ -1.2
CNGA1P29973 AC026826.1-201ENST00000493002 361 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.56□□□□□ -1.2
CNGA1P29973 HMGB1P47-201ENST00000511281 589 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.56□□□□□ -1.2
CNGA1P29973 AP003102.1-201ENST00000525638 661 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CNGA1P29973 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC7.56□□□□□ -1.2
CNGA1P29973 FXNP1-201ENST00000555153 337 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC7.56□□□□□ -1.2
CNGA1P29973 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 AC011458.1-201ENST00000604034 617 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 AC124916.2-201ENST00000604416 224 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 AL356608.1-201ENST00000610034 820 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.56□□□□□ -1.2
CNGA1P29973 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
CNGA1P29973 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.56□□□□□ -1.2
CNGA1P29973 MTCO1P25-201ENST00000414449 1799 ntBASIC7.56□□□□□ -1.2
CNGA1P29973 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CNGA1P29973 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CNGA1P29973 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.56□□□□□ -1.2
CNGA1P29973 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.56□□□□□ -1.2
CNGA1P29973 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CNGA1P29973 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CNGA1P29973 LCOR-201ENST00000286067 4542 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.55□□□□□ -1.2
CNGA1P29973 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 SNORD115-48-201ENST00000364764 76 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 RN7SKP271-201ENST00000410528 320 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.55□□□□□ -1.2
CNGA1P29973 DUTP4-201ENST00000424782 475 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CNGA1P29973 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.55□□□□□ -1.2
CNGA1P29973 SUMO2P1-206ENST00000445436 284 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 HMGB1P7-201ENST00000450921 612 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.55□□□□□ -1.2
CNGA1P29973 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.55□□□□□ -1.2
CNGA1P29973 RN7SL254P-201ENST00000460609 284 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.55□□□□□ -1.2
CNGA1P29973 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.55□□□□□ -1.2
CNGA1P29973 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.55□□□□□ -1.2
CNGA1P29973 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.55□□□□□ -1.2
CNGA1P29973 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.55□□□□□ -1.2
CNGA1P29973 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.55□□□□□ -1.2
CNGA1P29973 AC090115.2-201ENST00000548060 883 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 AC016144.1-201ENST00000548175 1087 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 AC106785.3-201ENST00000564064 847 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 AC079148.1-201ENST00000565944 819 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.55□□□□□ -1.2
CNGA1P29973 AC013731.1-201ENST00000604340 883 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 AC120053.1-201ENST00000607706 736 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 AC110792.4-201ENST00000609843 298 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CNGA1P29973 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.55□□□□□ -1.2
CNGA1P29973 AC026124.2-201ENST00000621847 656 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CNGA1P29973 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.55□□□□□ -1.2
CNGA1P29973 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CNGA1P29973 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.55□□□□□ -1.2
CNGA1P29973 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 AC104966.1-201ENST00000467010 1464 ntBASIC7.55□□□□□ -1.2
CNGA1P29973 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CNGA1P29973 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.55□□□□□ -1.2
CNGA1P29973 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CNGA1P29973 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.54□□□□□ -1.2
CNGA1P29973 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.54□□□□□ -1.2
CNGA1P29973 PSMC1P6-201ENST00000477233 1319 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CNGA1P29973 AC093909.5-201ENST00000621839 1799 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms