Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
UBCP0CG48 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.45□□□□□ -1.54
UBCP0CG48 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 RN7SKP205-201ENST00000410999 307 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.45□□□□□ -1.54
UBCP0CG48 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 RPL12P16-201ENST00000431098 498 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.45□□□□□ -1.54
UBCP0CG48 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.45□□□□□ -1.54
UBCP0CG48 AL645939.3-201ENST00000435408 225 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.45□□□□□ -1.54
UBCP0CG48 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.45□□□□□ -1.54
UBCP0CG48 AL158214.1-201ENST00000444423 404 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.45□□□□□ -1.54
UBCP0CG48 AC009244.1-201ENST00000450566 258 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 AC112187.1-201ENST00000455837 479 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 RN7SL643P-201ENST00000471845 291 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 AC005017.1-201ENST00000482002 490 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 RN7SL350P-201ENST00000492591 299 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
UBCP0CG48 AC008868.1-201ENST00000509786 737 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.45□□□□□ -1.54
UBCP0CG48 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
UBCP0CG48 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.45□□□□□ -1.54
UBCP0CG48 AC105036.1-201ENST00000566222 271 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.45□□□□□ -1.54
UBCP0CG48 AC133552.4-201ENST00000576103 676 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.45□□□□□ -1.54
UBCP0CG48 AC006120.1-201ENST00000579375 546 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.45□□□□□ -1.54
UBCP0CG48 AC004890.3-201ENST00000605566 1095 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 AC069234.4-201ENST00000621276 412 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.45□□□□□ -1.54
UBCP0CG48 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 AC004023.1-201ENST00000561473 1744 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBCP0CG48 AC092451.3-201ENST00000625067 1343 ntBASIC5.45□□□□□ -1.54
UBCP0CG48 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.45□□□□□ -1.54
UBCP0CG48 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
UBCP0CG48 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.44□□□□□ -1.54
UBCP0CG48 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.44□□□□□ -1.54
UBCP0CG48 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.44□□□□□ -1.54
UBCP0CG48 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.44□□□□□ -1.54
UBCP0CG48 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.44□□□□□ -1.54
UBCP0CG48 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.44□□□□□ -1.54
UBCP0CG48 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.44□□□□□ -1.54
UBCP0CG48 RAB28P2-201ENST00000454299 641 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
UBCP0CG48 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
UBCP0CG48 AC018645.1-201ENST00000505003 109 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 AC093816.1-201ENST00000515076 913 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.44□□□□□ -1.54
UBCP0CG48 RNA5SP75-201ENST00000516841 111 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 AP002004.1-206ENST00000532441 876 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.44□□□□□ -1.54
UBCP0CG48 AC016839.1-201ENST00000578162 867 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 AC100832.2-201ENST00000582080 776 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.44□□□□□ -1.54
UBCP0CG48 AC099777.1-201ENST00000603779 1070 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBCP0CG48 MIR6736-201ENST00000616799 59 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 RNA5SP439-201ENST00000617595 124 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 AC010809.3-201ENST00000621310 641 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 AL161912.4-201ENST00000623889 2468 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.44□□□□□ -1.54
UBCP0CG48 CASC19-260ENST00000641828 2001 ntBASIC5.44□□□□□ -1.54
UBCP0CG48 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.44□□□□□ -1.54
UBCP0CG48 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.44□□□□□ -1.54
UBCP0CG48 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.44□□□□□ -1.54
UBCP0CG48 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
UBCP0CG48 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
UBCP0CG48 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
UBCP0CG48 TET1P1-201ENST00000426627 2301 ntBASIC5.43□□□□□ -1.54
UBCP0CG48 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
UBCP0CG48 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UBCP0CG48 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UBCP0CG48 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UBCP0CG48 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.43□□□□□ -1.54
UBCP0CG48 OR7A2P-201ENST00000304105 930 ntBASIC5.43□□□□□ -1.54
UBCP0CG48 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
UBCP0CG48 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms