Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RN7SKP117-201ENST00000410175 264 ntBASIC6.74□□□□□ -1.33
TPM1P09493 CDC42P6-201ENST00000421246 576 ntBASIC6.74□□□□□ -1.33
TPM1P09493 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.74□□□□□ -1.33
TPM1P09493 HSPE1P27-201ENST00000430808 296 ntBASIC6.74□□□□□ -1.33
TPM1P09493 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.74□□□□□ -1.33
TPM1P09493 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TPM1P09493 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.74□□□□□ -1.33
TPM1P09493 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.74□□□□□ -1.33
TPM1P09493 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.74□□□□□ -1.33
TPM1P09493 AP001994.1-201ENST00000527539 826 ntBASIC6.74□□□□□ -1.33
TPM1P09493 AL049779.3-201ENST00000557141 606 ntBASIC6.74□□□□□ -1.33
TPM1P09493 AC133552.4-201ENST00000576103 676 ntBASIC6.74□□□□□ -1.33
TPM1P09493 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.74□□□□□ -1.33
TPM1P09493 RPL7AP69-201ENST00000595306 806 ntBASIC6.74□□□□□ -1.33
TPM1P09493 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC6.74□□□□□ -1.33
TPM1P09493 MIR6731-201ENST00000614863 72 ntBASIC6.74□□□□□ -1.33
TPM1P09493 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM1P09493 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM1P09493 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TPM1P09493 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM1P09493 AL078595.2-201ENST00000605309 1780 ntBASIC6.74□□□□□ -1.33
TPM1P09493 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
TPM1P09493 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TPM1P09493 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 PPBPP2-201ENST00000513150 1362 ntBASIC6.73□□□□□ -1.33
TPM1P09493 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TPM1P09493 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TPM1P09493 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.73□□□□□ -1.33
TPM1P09493 FTH1P26-201ENST00000406512 701 ntBASIC6.73□□□□□ -1.33
TPM1P09493 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.73□□□□□ -1.33
TPM1P09493 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 AC117434.1-201ENST00000419971 836 ntBASIC6.73□□□□□ -1.33
TPM1P09493 PPIAP23-201ENST00000420099 497 ntBASIC6.73□□□□□ -1.33
TPM1P09493 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.73□□□□□ -1.33
TPM1P09493 PTPN2P1-201ENST00000423212 1072 ntBASIC6.73□□□□□ -1.33
TPM1P09493 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 E2F6P1-201ENST00000428850 745 ntBASIC6.73□□□□□ -1.33
TPM1P09493 RPS3AP38-201ENST00000435889 763 ntBASIC6.73□□□□□ -1.33
TPM1P09493 E2F6P3-201ENST00000441743 743 ntBASIC6.73□□□□□ -1.33
TPM1P09493 COL11A2P1-205ENST00000441798 676 ntBASIC6.73□□□□□ -1.33
TPM1P09493 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.73□□□□□ -1.33
TPM1P09493 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 RBMY2EP-202ENST00000456360 940 ntBASIC6.73□□□□□ -1.33
TPM1P09493 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.73□□□□□ -1.33
TPM1P09493 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 RPS10P28-201ENST00000480396 498 ntBASIC6.73□□□□□ -1.33
TPM1P09493 ST13P12-201ENST00000508958 1094 ntBASIC6.73□□□□□ -1.33
TPM1P09493 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.73□□□□□ -1.33
TPM1P09493 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 TPM3P3-201ENST00000521343 354 ntBASIC6.73□□□□□ -1.33
TPM1P09493 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
TPM1P09493 AC092865.1-201ENST00000544395 1023 ntBASIC6.73□□□□□ -1.33
TPM1P09493 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.73□□□□□ -1.33
TPM1P09493 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.73□□□□□ -1.33
TPM1P09493 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.73□□□□□ -1.33
TPM1P09493 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 AC005355.2-201ENST00000625064 484 ntBASIC6.73□□□□□ -1.33
TPM1P09493 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 AC006453.3-201ENST00000635891 377 ntBASIC6.73□□□□□ -1.33
TPM1P09493 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
TPM1P09493 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
TPM1P09493 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TPM1P09493 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM1P09493 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM1P09493 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM1P09493 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM1P09493 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM1P09493 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM1P09493 AL022311.1-201ENST00000623726 19416 ntBASIC6.72□□□□□ -1.33
TPM1P09493 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TPM1P09493 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TPM1P09493 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.72□□□□□ -1.33
TPM1P09493 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TPM1P09493 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.72□□□□□ -1.33
TPM1P09493 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM1P09493 USP24P1-201ENST00000433802 779 ntBASIC6.72□□□□□ -1.33
TPM1P09493 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM1P09493 RPL23AP60-201ENST00000450011 454 ntBASIC6.72□□□□□ -1.33
TPM1P09493 AL162739.1-201ENST00000450606 307 ntBASIC6.72□□□□□ -1.33
TPM1P09493 RPS3AP49-201ENST00000472161 790 ntBASIC6.72□□□□□ -1.33
TPM1P09493 RN7SL369P-201ENST00000477138 299 ntBASIC6.72□□□□□ -1.33
TPM1P09493 RN7SL326P-201ENST00000477493 296 ntBASIC6.72□□□□□ -1.33
TPM1P09493 TRBV5-2-201ENST00000489095 273 ntBASIC6.72□□□□□ -1.33
TPM1P09493 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TPM1P09493 AC093816.1-201ENST00000515076 913 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms