Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.52□□□□□ -1.53
SFTPBP07988 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SFTPBP07988 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.52□□□□□ -1.53
SFTPBP07988 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.52□□□□□ -1.53
SFTPBP07988 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.52□□□□□ -1.53
SFTPBP07988 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.52□□□□□ -1.53
SFTPBP07988 RN7SL836P-201ENST00000476140 296 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 RPL5P14-201ENST00000494197 878 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 AC114324.2-202ENST00000503812 134 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 AC091965.3-201ENST00000506236 208 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SFTPBP07988 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.52□□□□□ -1.53
SFTPBP07988 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.52□□□□□ -1.53
SFTPBP07988 SCARNA5-201ENST00000516201 276 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.52□□□□□ -1.53
SFTPBP07988 IGHV1-14-201ENST00000523391 241 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.52□□□□□ -1.53
SFTPBP07988 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.52□□□□□ -1.53
SFTPBP07988 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.52□□□□□ -1.53
SFTPBP07988 AC005519.1-201ENST00000554490 601 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 AL121579.2-201ENST00000555466 590 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 NPM1P5-201ENST00000557228 838 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 SNORD96A-201ENST00000606577 79 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.52□□□□□ -1.53
SFTPBP07988 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 U1.41-201ENST00000617626 165 ntBASIC5.52□□□□□ -1.53
SFTPBP07988 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.52□□□□□ -1.53
SFTPBP07988 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SFTPBP07988 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SFTPBP07988 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.52□□□□□ -1.53
SFTPBP07988 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SFTPBP07988 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SFTPBP07988 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SFTPBP07988 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SFTPBP07988 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SFTPBP07988 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SFTPBP07988 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SFTPBP07988 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SFTPBP07988 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SFTPBP07988 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.51□□□□□ -1.53
SFTPBP07988 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.51□□□□□ -1.53
SFTPBP07988 AC105235.1-201ENST00000623208 1816 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SFTPBP07988 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SFTPBP07988 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
SFTPBP07988 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
SFTPBP07988 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SFTPBP07988 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SFTPBP07988 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SFTPBP07988 RNA5SP350-201ENST00000363298 111 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SFTPBP07988 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.51□□□□□ -1.53
SFTPBP07988 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SFTPBP07988 RNA5SP115-201ENST00000411160 107 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.51□□□□□ -1.53
SFTPBP07988 RPL7AP14-201ENST00000424041 802 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AC003989.1-201ENST00000434569 565 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AC010086.1-201ENST00000437359 1052 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.51□□□□□ -1.53
SFTPBP07988 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.51□□□□□ -1.53
SFTPBP07988 AC009237.1-201ENST00000442127 744 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 UBBP5-201ENST00000446970 266 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.51□□□□□ -1.53
SFTPBP07988 AL445991.1-201ENST00000450381 475 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AC099670.1-201ENST00000455141 783 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AC004890.1-201ENST00000461005 181 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 RN7SL393P-201ENST00000463588 296 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.51□□□□□ -1.53
SFTPBP07988 IGKV2-19-201ENST00000518132 283 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AC008676.3-201ENST00000521237 435 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 HNRNPRP2-201ENST00000528421 743 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.51□□□□□ -1.53
SFTPBP07988 TRAV11-201ENST00000539512 339 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.51□□□□□ -1.53
SFTPBP07988 RN7SL208P-201ENST00000577964 296 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AP000919.1-201ENST00000582850 985 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.51□□□□□ -1.53
SFTPBP07988 AC012175.1-201ENST00000603755 531 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.51□□□□□ -1.53
SFTPBP07988 MIR6823-201ENST00000622118 61 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 AC243960.7-201ENST00000623532 707 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.51□□□□□ -1.53
SFTPBP07988 AL132640.3-201ENST00000630473 177 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SFTPBP07988 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SFTPBP07988 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SFTPBP07988 AC011815.2-201ENST00000618230 2021 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SFTPBP07988 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.51□□□□□ -1.53
SFTPBP07988 AL592429.1-201ENST00000403909 1473 ntBASIC5.51□□□□□ -1.53
SFTPBP07988 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SFTPBP07988 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.51□□□□□ -1.53
SFTPBP07988 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SFTPBP07988 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.5□□□□□ -1.53
SFTPBP07988 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SFTPBP07988 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SFTPBP07988 CAP1P2-201ENST00000417455 1409 ntBASIC5.5□□□□□ -1.53
SFTPBP07988 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
SFTPBP07988 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms