Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RPL3P11-201ENST00000434028 1146 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.89□□□□□ -1.47
CLPTM1O96005 BMS1P11-201ENST00000442351 885 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 RPS27AP3-201ENST00000453803 454 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.89□□□□□ -1.47
CLPTM1O96005 BMS1P9-201ENST00000457640 885 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.89□□□□□ -1.47
CLPTM1O96005 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.89□□□□□ -1.47
CLPTM1O96005 SNORA70.11-201ENST00000515987 138 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 SNORA70.13-201ENST00000516116 138 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.89□□□□□ -1.47
CLPTM1O96005 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.89□□□□□ -1.47
CLPTM1O96005 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.89□□□□□ -1.47
CLPTM1O96005 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CLPTM1O96005 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.89□□□□□ -1.47
CLPTM1O96005 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 AC068408.1-201ENST00000577406 1144 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.89□□□□□ -1.47
CLPTM1O96005 AC027334.1-201ENST00000603257 310 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 AC005277.2-201ENST00000617898 390 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 MAPK10-350ENST00000641777 965 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 AC125336.1-201ENST00000508893 2827 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.89□□□□□ -1.47
CLPTM1O96005 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 AC005261.6-201ENST00000623072 1387 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CLPTM1O96005 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1O96005 MTCO1P7-201ENST00000419523 1542 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 AC095038.1-201ENST00000429248 1591 ntBASIC5.89□□□□□ -1.47
CLPTM1O96005 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLPTM1O96005 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLPTM1O96005 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLPTM1O96005 AC015689.2-201ENST00000528172 1738 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLPTM1O96005 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.88□□□□□ -1.47
CLPTM1O96005 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 AC097063.1-201ENST00000426714 1797 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CLPTM1O96005 PROS2P-201ENST00000474651 1951 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLPTM1O96005 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLPTM1O96005 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLPTM1O96005 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CLPTM1O96005 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.88□□□□□ -1.47
CLPTM1O96005 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 RNU6-167P-201ENST00000384292 106 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CLPTM1O96005 AL079341.1-201ENST00000404701 1207 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.88□□□□□ -1.47
CLPTM1O96005 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.88□□□□□ -1.47
CLPTM1O96005 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 PAICSP2-201ENST00000429118 1150 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CLPTM1O96005 CYCSP51-201ENST00000443545 318 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 RN7SL216P-201ENST00000471607 298 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 DEFB109A-201ENST00000482450 265 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 NPM1P28-201ENST00000492269 840 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CLPTM1O96005 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.88□□□□□ -1.47
CLPTM1O96005 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.88□□□□□ -1.47
CLPTM1O96005 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.88□□□□□ -1.47
CLPTM1O96005 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.88□□□□□ -1.47
CLPTM1O96005 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.88□□□□□ -1.47
CLPTM1O96005 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 CCNT2P1-201ENST00000423082 1315 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLPTM1O96005 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CLPTM1O96005 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLPTM1O96005 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 UGT2B24P-201ENST00000514441 1597 ntBASIC5.88□□□□□ -1.47
CLPTM1O96005 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.88□□□□□ -1.47
CLPTM1O96005 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.88□□□□□ -1.47
CLPTM1O96005 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CLPTM1O96005 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.88□□□□□ -1.47
CLPTM1O96005 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms