Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
MBD4O95243 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.42□□□□□ -1.22
MBD4O95243 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.42□□□□□ -1.22
MBD4O95243 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.42□□□□□ -1.22
MBD4O95243 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.42□□□□□ -1.22
MBD4O95243 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.42□□□□□ -1.22
MBD4O95243 HSPD1P9-201ENST00000420325 1636 ntBASIC7.41□□□□□ -1.22
MBD4O95243 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
MBD4O95243 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
MBD4O95243 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.41□□□□□ -1.22
MBD4O95243 COX6B1P3-201ENST00000312310 260 ntBASIC7.41□□□□□ -1.22
MBD4O95243 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
MBD4O95243 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.41□□□□□ -1.22
MBD4O95243 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.41□□□□□ -1.22
MBD4O95243 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.41□□□□□ -1.22
MBD4O95243 AC130360.1-201ENST00000425489 1117 ntBASIC7.41□□□□□ -1.22
MBD4O95243 AC115283.1-201ENST00000427353 400 ntBASIC7.41□□□□□ -1.22
MBD4O95243 GAPDHP34-201ENST00000432112 823 ntBASIC7.41□□□□□ -1.22
MBD4O95243 AL353662.1-201ENST00000439099 327 ntBASIC7.41□□□□□ -1.22
MBD4O95243 RPL5P10-201ENST00000445207 894 ntBASIC7.41□□□□□ -1.22
MBD4O95243 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.41□□□□□ -1.22
MBD4O95243 MTND4LP12-201ENST00000448237 295 ntBASIC7.41□□□□□ -1.22
MBD4O95243 AC009963.3-201ENST00000458090 486 ntBASIC7.41□□□□□ -1.22
MBD4O95243 RPL5P12-201ENST00000477071 851 ntBASIC7.41□□□□□ -1.22
MBD4O95243 AC130365.2-201ENST00000525882 1201 ntBASIC7.41□□□□□ -1.22
MBD4O95243 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.41□□□□□ -1.22
MBD4O95243 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 CYCSP38-201ENST00000559840 322 ntBASIC7.41□□□□□ -1.22
MBD4O95243 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC7.41□□□□□ -1.22
MBD4O95243 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
MBD4O95243 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.41□□□□□ -1.22
MBD4O95243 AC068768.2-201ENST00000602352 343 ntBASIC7.41□□□□□ -1.22
MBD4O95243 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.41□□□□□ -1.22
MBD4O95243 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.41□□□□□ -1.22
MBD4O95243 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.41□□□□□ -1.22
MBD4O95243 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
MBD4O95243 AC092724.1-201ENST00000624623 3397 ntBASIC7.41□□□□□ -1.22
MBD4O95243 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.41□□□□□ -1.22
MBD4O95243 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MBD4O95243 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
MBD4O95243 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.41□□□□□ -1.22
MBD4O95243 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.4□□□□□ -1.22
MBD4O95243 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 AC024587.1-201ENST00000505925 2157 ntBASIC7.4□□□□□ -1.22
MBD4O95243 AL033543.1-201ENST00000623440 13454 ntBASIC7.4□□□□□ -1.22
MBD4O95243 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MBD4O95243 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MBD4O95243 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MBD4O95243 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MBD4O95243 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MBD4O95243 AL132875.1-201ENST00000403623 949 ntBASIC7.4□□□□□ -1.22
MBD4O95243 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.4□□□□□ -1.22
MBD4O95243 RNA5SP156-201ENST00000410250 110 ntBASIC7.4□□□□□ -1.22
MBD4O95243 AL691447.1-201ENST00000419456 387 ntBASIC7.4□□□□□ -1.22
MBD4O95243 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 AL355355.1-201ENST00000442900 793 ntBASIC7.4□□□□□ -1.22
MBD4O95243 AC068228.1-201ENST00000461723 211 ntBASIC7.4□□□□□ -1.22
MBD4O95243 AC073594.1-201ENST00000462065 364 ntBASIC7.4□□□□□ -1.22
MBD4O95243 RN7SL221P-201ENST00000466190 281 ntBASIC7.4□□□□□ -1.22
MBD4O95243 AC115223.1-201ENST00000466377 870 ntBASIC7.4□□□□□ -1.22
MBD4O95243 RBBP4P1-201ENST00000502424 1276 ntBASIC7.4□□□□□ -1.22
MBD4O95243 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.4□□□□□ -1.22
MBD4O95243 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.4□□□□□ -1.22
MBD4O95243 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.4□□□□□ -1.22
MBD4O95243 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 RNU4ATAC-201ENST00000580972 127 ntBASIC7.4□□□□□ -1.22
MBD4O95243 NPIPB1P-202ENST00000588786 828 ntBASIC7.4□□□□□ -1.22
MBD4O95243 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC7.4□□□□□ -1.22
MBD4O95243 AC024589.2-201ENST00000605642 1294 ntBASIC7.4□□□□□ -1.22
MBD4O95243 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.4□□□□□ -1.22
MBD4O95243 AL137067.2-201ENST00000621202 131 ntBASIC7.4□□□□□ -1.22
MBD4O95243 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 HDAC1P2-201ENST00000453661 1398 ntBASIC7.4□□□□□ -1.22
MBD4O95243 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
MBD4O95243 AC093225.1-201ENST00000506867 1408 ntBASIC7.4□□□□□ -1.22
MBD4O95243 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
MBD4O95243 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
MBD4O95243 LYARP1-201ENST00000436977 1501 ntBASIC7.4□□□□□ -1.22
MBD4O95243 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms