Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.12□□□□□ -1.43
SHOX2O60902 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.12□□□□□ -1.43
SHOX2O60902 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.12□□□□□ -1.43
SHOX2O60902 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.12□□□□□ -1.43
SHOX2O60902 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.12□□□□□ -1.43
SHOX2O60902 AC114402.2-201ENST00000432760 643 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.12□□□□□ -1.43
SHOX2O60902 SNRPBP1-201ENST00000443634 282 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 AC092106.1-201ENST00000444291 373 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 RPL23AP60-201ENST00000450011 454 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 AC022080.2-201ENST00000452932 533 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 RN7SL352P-201ENST00000466002 277 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 RN7SL456P-201ENST00000469290 295 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 AC126615.1-201ENST00000470084 630 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.12□□□□□ -1.43
SHOX2O60902 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SHOX2O60902 RN7SL612P-201ENST00000497704 295 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 AC010343.2-201ENST00000510162 224 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 AC078899.1-201ENST00000521432 1185 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.12□□□□□ -1.43
SHOX2O60902 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.12□□□□□ -1.43
SHOX2O60902 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.12□□□□□ -1.43
SHOX2O60902 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.12□□□□□ -1.43
SHOX2O60902 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.12□□□□□ -1.43
SHOX2O60902 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHOX2O60902 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.12□□□□□ -1.43
SHOX2O60902 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.12□□□□□ -1.43
SHOX2O60902 AC009852.2-201ENST00000567898 485 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 AL163952.1-202ENST00000569625 600 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 RNU4ATAC-201ENST00000580972 127 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 DYNLL1P1-201ENST00000595442 269 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 AL162574.1-201ENST00000615702 950 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.12□□□□□ -1.43
SHOX2O60902 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.12□□□□□ -1.43
SHOX2O60902 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.12□□□□□ -1.43
SHOX2O60902 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.12□□□□□ -1.43
SHOX2O60902 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.12□□□□□ -1.43
SHOX2O60902 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHOX2O60902 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.12□□□□□ -1.43
SHOX2O60902 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHOX2O60902 AL137058.3-201ENST00000624531 3099 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.11□□□□□ -1.43
SHOX2O60902 AP001284.1-201ENST00000528393 2118 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
SHOX2O60902 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.11□□□□□ -1.43
SHOX2O60902 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 SNORD16-201ENST00000362803 99 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 U3.7-201ENST00000363668 216 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.11□□□□□ -1.43
SHOX2O60902 AL590635.1-201ENST00000406314 586 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 RNA5SP431-201ENST00000410312 120 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 RN7SKP166-201ENST00000410812 305 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.11□□□□□ -1.43
SHOX2O60902 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.11□□□□□ -1.43
SHOX2O60902 AL157884.1-201ENST00000424561 454 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 AL138479.1-201ENST00000426913 484 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.11□□□□□ -1.43
SHOX2O60902 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 AL353803.3-201ENST00000444641 335 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.11□□□□□ -1.43
SHOX2O60902 SRP68P2-201ENST00000456184 254 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.11□□□□□ -1.43
SHOX2O60902 RN7SL741P-201ENST00000482473 289 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 IGKV2D-38-201ENST00000518423 240 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.11□□□□□ -1.43
SHOX2O60902 SETP17-201ENST00000534163 817 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 NF1P12-201ENST00000549593 583 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.11□□□□□ -1.43
SHOX2O60902 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.11□□□□□ -1.43
SHOX2O60902 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.11□□□□□ -1.43
SHOX2O60902 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.11□□□□□ -1.43
SHOX2O60902 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.11□□□□□ -1.43
SHOX2O60902 ARGFXP2-201ENST00000579304 949 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 MIR4310-201ENST00000582950 57 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.11□□□□□ -1.43
SHOX2O60902 FXYD6P1-201ENST00000604857 285 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 AC092944.2-201ENST00000605443 889 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 OR51C1P-201ENST00000608504 942 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.11□□□□□ -1.43
SHOX2O60902 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.11□□□□□ -1.43
SHOX2O60902 SNX18P12-201ENST00000624821 759 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.11□□□□□ -1.43
SHOX2O60902 AC130304.1-201ENST00000622942 2385 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SHOX2O60902 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.11□□□□□ -1.43
SHOX2O60902 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SHOX2O60902 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHOX2O60902 OR2A3P-202ENST00000641249 1776 ntBASIC6.11□□□□□ -1.43
SHOX2O60902 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms