Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
MSI1O43347 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSI1O43347 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.53□□□□□ -1.36
MSI1O43347 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
MSI1O43347 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
MSI1O43347 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MSI1O43347 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSI1O43347 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
MSI1O43347 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSI1O43347 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.53□□□□□ -1.36
MSI1O43347 AL139805.1-201ENST00000407837 289 ntBASIC6.53□□□□□ -1.36
MSI1O43347 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.53□□□□□ -1.36
MSI1O43347 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC6.53□□□□□ -1.36
MSI1O43347 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.53□□□□□ -1.36
MSI1O43347 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.53□□□□□ -1.36
MSI1O43347 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.53□□□□□ -1.36
MSI1O43347 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.53□□□□□ -1.36
MSI1O43347 AL500527.1-201ENST00000448532 255 ntBASIC6.53□□□□□ -1.36
MSI1O43347 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.53□□□□□ -1.36
MSI1O43347 RN7SL326P-201ENST00000477493 296 ntBASIC6.53□□□□□ -1.36
MSI1O43347 RN7SL170P-201ENST00000487098 295 ntBASIC6.53□□□□□ -1.36
MSI1O43347 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MSI1O43347 AC091874.2-201ENST00000505889 720 ntBASIC6.53□□□□□ -1.36
MSI1O43347 AC095052.1-201ENST00000509955 863 ntBASIC6.53□□□□□ -1.36
MSI1O43347 MAST4-IT1-201ENST00000514241 658 ntBASIC6.53□□□□□ -1.36
MSI1O43347 HSD3BP3-201ENST00000514706 994 ntBASIC6.53□□□□□ -1.36
MSI1O43347 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.53□□□□□ -1.36
MSI1O43347 AC036111.2-201ENST00000533247 901 ntBASIC6.53□□□□□ -1.36
MSI1O43347 AC084121.1-201ENST00000533882 835 ntBASIC6.53□□□□□ -1.36
MSI1O43347 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MSI1O43347 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.53□□□□□ -1.36
MSI1O43347 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.53□□□□□ -1.36
MSI1O43347 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.53□□□□□ -1.36
MSI1O43347 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.53□□□□□ -1.36
MSI1O43347 MRPS21P8-201ENST00000569196 235 ntBASIC6.53□□□□□ -1.36
MSI1O43347 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.53□□□□□ -1.36
MSI1O43347 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.53□□□□□ -1.36
MSI1O43347 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.53□□□□□ -1.36
MSI1O43347 AC005229.3-201ENST00000603438 323 ntBASIC6.53□□□□□ -1.36
MSI1O43347 AC104820.1-201ENST00000624183 307 ntBASIC6.53□□□□□ -1.36
MSI1O43347 AC073592.6-201ENST00000624271 415 ntBASIC6.53□□□□□ -1.36
MSI1O43347 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSI1O43347 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.53□□□□□ -1.36
MSI1O43347 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
MSI1O43347 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
MSI1O43347 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.53□□□□□ -1.36
MSI1O43347 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.53□□□□□ -1.36
MSI1O43347 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
MSI1O43347 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.52□□□□□ -1.37
MSI1O43347 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MSI1O43347 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.52□□□□□ -1.37
MSI1O43347 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MSI1O43347 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MSI1O43347 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MSI1O43347 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MSI1O43347 AC092724.1-201ENST00000624623 3397 ntBASIC6.52□□□□□ -1.37
MSI1O43347 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
MSI1O43347 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
MSI1O43347 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MSI1O43347 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
MSI1O43347 RNA5SP110-201ENST00000362638 115 ntBASIC6.52□□□□□ -1.37
MSI1O43347 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.52□□□□□ -1.37
MSI1O43347 AL445238.1-204ENST00000400311 463 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AL136116.2-201ENST00000404020 785 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.52□□□□□ -1.37
MSI1O43347 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.52□□□□□ -1.37
MSI1O43347 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.52□□□□□ -1.37
MSI1O43347 AL354707.3-201ENST00000427308 331 ntBASIC6.52□□□□□ -1.37
MSI1O43347 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MSI1O43347 AC009237.1-201ENST00000442127 744 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AL590004.3-202ENST00000445883 451 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AC093166.3-201ENST00000448785 303 ntBASIC6.52□□□□□ -1.37
MSI1O43347 HIGD1AP16-201ENST00000450986 258 ntBASIC6.52□□□□□ -1.37
MSI1O43347 VPS25P1-201ENST00000455691 508 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.52□□□□□ -1.37
MSI1O43347 CTSLP6-201ENST00000458273 1002 ntBASIC6.52□□□□□ -1.37
MSI1O43347 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.52□□□□□ -1.37
MSI1O43347 RN7SL254P-201ENST00000460609 284 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AP002453.1-201ENST00000492327 668 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AGGF1P3-201ENST00000493675 1213 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AC122718.2-201ENST00000505325 591 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.52□□□□□ -1.37
MSI1O43347 KHDC1P1-201ENST00000511053 508 ntBASIC6.52□□□□□ -1.37
MSI1O43347 CCNHP1-201ENST00000513311 678 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AC011853.1-201ENST00000518911 454 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AC073581.1-201ENST00000519036 575 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.52□□□□□ -1.37
MSI1O43347 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.52□□□□□ -1.37
MSI1O43347 AC092865.1-201ENST00000544395 1023 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.52□□□□□ -1.37
MSI1O43347 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.52□□□□□ -1.37
MSI1O43347 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MSI1O43347 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
MSI1O43347 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.52□□□□□ -1.37
MSI1O43347 AC027229.1-201ENST00000583887 253 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AC067852.5-201ENST00000589299 310 ntBASIC6.52□□□□□ -1.37
MSI1O43347 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.52□□□□□ -1.37
MSI1O43347 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.52□□□□□ -1.37
MSI1O43347 AC124916.2-201ENST00000604416 224 ntBASIC6.52□□□□□ -1.37
MSI1O43347 AL591167.1-201ENST00000607321 456 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms