Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC004386.1-201ENST00000393214 761 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AL445238.1-204ENST00000400311 463 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AC115283.1-201ENST00000427353 400 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AC079807.1-201ENST00000429993 481 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 KCTD9P1-201ENST00000430462 1167 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AC002553.3-201ENST00000453002 341 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 PPIAP27-201ENST00000453800 265 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 IGHV1-14-201ENST00000523391 241 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AC092681.3-201ENST00000609463 678 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AL359742.1-201ENST00000622497 540 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AC024651.2-201ENST00000562480 2098 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC005034.3-201ENST00000604845 1747 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AL161901.1-201ENST00000624954 3425 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AL162456.1-201ENST00000634535 2006 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 OR11H13P-201ENST00000359695 979 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 MIR130B-202ENST00000385018 82 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 CYP4F30P-202ENST00000420048 405 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 DNAJA1P5-201ENST00000440278 943 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC092967.1-201ENST00000449016 481 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 NDUFA5P5-201ENST00000468361 342 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AL158068.1-201ENST00000506116 616 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 LDHAP1-201ENST00000509421 992 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 CR383658.1-201ENST00000514609 734 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 RNA5SP434-201ENST00000516647 121 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 Y_RNA.710-201ENST00000516975 110 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC073581.1-201ENST00000519036 575 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC090826.1-203ENST00000569235 490 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC073333.2-201ENST00000603589 769 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AL136097.3-201ENST00000611097 505 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC022106.1-201ENST00000612834 766 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC024255.1-201ENST00000614376 102 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AL445649.1-201ENST00000615941 691 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 RFPL4AP6-201ENST00000616792 846 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 MIR6861-201ENST00000618657 64 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC022400.9-201ENST00000623633 273 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AC006213.6-201ENST00000623722 4179 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 AP000866.6-201ENST00000638898 3579 ntBASIC5.54□□□□□ -1.52
CLCF1Q9UBD9 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AP000547.3-204ENST00000588548 2523 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms